RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 CGB3P0DN86 165 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 CGB7P0DN87 165 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 KCNJ3P48549 501 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 MPV17LQ2QL34 196 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 PAN3Q58A45 887 aaKnown RBP10.55□□□□□ -0.72
CTSB-209ENST00000525315 AWAT2Q6E213 333 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 CD200R1LQ6Q8B3 271 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 SUMF2Q8NBJ7 301 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 SLC25A28Q96A46 364 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 BARHL1Q9BZE3 327 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 ZNF581Q9P0T4 197 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 FAM96BQ9Y3D0 163 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 POMT1Q9Y6A1 747 aa10.55□□□□□ -0.72
CTSB-209ENST00000525315 ANK2Q01484 3957 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 STAB1Q9NY15 2570 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 TRGV10A0A0A0MS01 117 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 MEIOCA2RUB1 952 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 TMEM89A2RUT3 159 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A10PA6NDY2 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A18PA6NE21 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A16PA6NEW6 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A20PA6NIJ5 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A8PA6NJQ4 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A7PA6NKC0 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A22PA8MWA6 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A12PA8MX19 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A5PA8MXJ8 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A23PA8MXZ1 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 ARL6IP5O75915 188 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FBP1P09467 338 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A15PP0C7V4 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A13PP0C7W8 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A14PP0C7W9 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 FAM90A24PP0C7X0 464 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 UBBP0CG47 229 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 SAA4P35542 130 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 IER3P46695 156 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 ATXN7L3Q14CW9 347 aaPredicted RBP10.54□□□□□ -0.72
CTSB-209ENST00000525315 RSBN1Q5VWQ0 802 aaPredicted RBP10.54□□□□□ -0.72
CTSB-209ENST00000525315 C16orf87Q6PH81 154 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 ZNF773Q6PK81 442 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 OR11H6Q8NGC7 330 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 OR13D1Q8NGV5 346 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 DUX5Q96PT3 197 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 GFI1Q99684 422 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 DPCDQ9BVM2 203 aaPredicted RBP10.54□□□□□ -0.72
CTSB-209ENST00000525315 SLITRK2Q9H156 845 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 MEGF9Q9H1U4 602 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 NDUFB11Q9NX14 153 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 DNHD1Q96M86 4753 aa10.54□□□□□ -0.72
CTSB-209ENST00000525315 TRDV1A0A1B0GX56 115 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 CCRL2O00421 344 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 SLC22A1O15245 554 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 MMP23AO75900 390 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 OR7C1O76099 320 aaPredicted RBP10.53□□□□□ -0.72
CTSB-209ENST00000525315 MGMTP16455 207 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 GALP22466 123 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 TAF9Q16594 264 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 C17orf58Q2M2W7 97 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 KCTD21Q4G0X4 260 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 SLC35E4Q6ICL7 350 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 HEPN1Q6WQI6 88 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 ZNF782Q6ZMW2 699 aaPredicted RBP10.53□□□□□ -0.72
CTSB-209ENST00000525315 TRAPPC6BQ86SZ2 158 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 ZNF565Q8N9K5 539 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 BEND2Q8NDZ0 799 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 TMEM104Q8NE00 496 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 PLPPR1Q8TBJ4 325 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 SSMEM1Q8WWF3 244 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 FCGR1BQ92637 280 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 GAL3ST2Q9H3Q3 398 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 BANF2Q9H503 90 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 LINC00574Q9H8X3 128 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 OR6C3Q9NZP0 311 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 ZNRD1Q9P1U0 126 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 RCC2Q9P258 522 aaKnown RBP10.53□□□□□ -0.72
CTSB-209ENST00000525315 KIF25Q9UIL4 384 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 SESN1Q9Y6P5 492 aa10.53□□□□□ -0.72
CTSB-209ENST00000525315 TRAV1-2A0A0B4J238 106 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 ZNF729A6NN14 1252 aaPredicted RBP10.52□□□□□ -0.73
CTSB-209ENST00000525315 ODF3BA8MYP8 253 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 HSPB6O14558 160 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 CRTAPO75718 401 aaPredicted RBP10.52□□□□□ -0.73
CTSB-209ENST00000525315 CLPXO76031 633 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 GLAP06280 429 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 VSIG8P0DPA2 414 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 HKR1P10072 659 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 CALRP27797 417 aaKnown RBP10.52□□□□□ -0.73
CTSB-209ENST00000525315 HTR2CP28335 458 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 COMPP49747 757 aaPredicted RBP10.52□□□□□ -0.73
CTSB-209ENST00000525315 PSMD7P51665 324 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 QRFPP83859 136 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 ATAD3CQ5T2N8 411 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 ZNF626Q68DY1 528 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 OR52W1Q6IF63 320 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 C17orf50Q8WW18 174 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 Q96M66 194 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 SELENOIQ9C0D9 397 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 TMEM133Q9H2Q1 129 aa10.52□□□□□ -0.73
CTSB-209ENST00000525315 DPAGT1Q9H3H5 408 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms