RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 C2orf74A8MZ97 194 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 K7EQS6 105 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 LAD1O00515 517 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 FFAR1O14842 300 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 KLRC4O43908 158 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 COX7A2P2O60397 106 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 NOS1APO75052 506 aaPredicted RBP3.94□□□□□ -1.78
USP47-204ENST00000525078 SCGB1C2P0DMR2 95 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 IL3RAP26951 378 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 SLC6A1P30531 599 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 CTRLP40313 264 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 CXCL5P42830 114 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 UBE2AP49459 152 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 PPP1CAP62136 330 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 MEF2CQ06413 473 aaPredicted RBP3.94□□□□□ -1.78
USP47-204ENST00000525078 YIF1BQ5BJH7 314 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 N4BP2L1Q5TBK1 243 aaPredicted RBP3.94□□□□□ -1.78
USP47-204ENST00000525078 TMEM215Q68D42 235 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 SFXN4Q6P4A7 337 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 ZNF773Q6PK81 442 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 LYPD2Q6UXB3 125 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 PRNTQ86SH4 94 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 LINC00596Q86U02 117 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 LINC00337Q8N6G1 96 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 ZNF645Q8N7E2 425 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 OR1L8Q8NGR8 309 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 SCGB1C1Q8TD33 95 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 ORAOV1Q8WV07 137 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 DYDC1Q8WWB3 177 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 DCUN1D1Q96GG9 259 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 OR2M2Q96R28 347 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 VGLL1Q99990 258 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 PRSS27Q9BQR3 290 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 HDHD3Q9BSH5 251 aaPredicted RBP3.94□□□□□ -1.78
USP47-204ENST00000525078 TBL1XR1Q9BZK7 514 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 TRIM4Q9C037 500 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 PRELID3BQ9Y3B1 194 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 HDGFL3Q9Y3E1 203 aa3.94□□□□□ -1.78
USP47-204ENST00000525078 FAM32AQ9Y421 112 aaKnown RBP3.94□□□□□ -1.78
USP47-204ENST00000525078 A0A0J9YWU9 116 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 MYBPHLA2RUH7 354 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 CD300LBA8K4G0 201 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 D6RAR5 112 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 INS-IGF2F8WCM5 200 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 CD5LO43866 347 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 HAND1O96004 215 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 IGLV2-23P01705 113 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 CD79AP11912 226 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 ZNF708P17019 499 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 CAPN2P17655 700 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 OMGP23515 440 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 GADD45AP24522 165 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 C1QTNF8P60827 252 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 RAB5BP61020 215 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 DAD1P61803 113 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 SSX1Q16384 188 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 BATFQ16520 125 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 ARHGAP11BQ3KRB8 267 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 HIGD2BQ4VC39 106 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 SLC36A1Q7Z2H8 476 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 CALHM3Q86XJ0 350 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 TGIF2LYQ8IUE0 185 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 ZNF584Q8IVC4 421 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 NATD1Q8N6N6 113 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 OR2V1Q8NHB1 315 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 TNFAIP8L1Q8WVP5 186 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 ZNF689Q96CS4 500 aaPredicted RBP3.93□□□□□ -1.78
USP47-204ENST00000525078 C16orf74Q96GX8 76 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 CEP170P1Q96L14 293 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 YPEL4Q96NS1 127 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 SLC17A9Q9BYT1 436 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 PCBD2Q9H0N5 130 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 CDC42EP4Q9H3Q1 356 aaKnown RBP3.93□□□□□ -1.78
USP47-204ENST00000525078 ZSCAN16Q9H4T2 348 aaPredicted RBP3.93□□□□□ -1.78
USP47-204ENST00000525078 DOK5Q9P104 306 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 ZNF223Q9UK11 482 aaPredicted RBP3.93□□□□□ -1.78
USP47-204ENST00000525078 HHLA2Q9UM44 414 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 PSG11Q9UQ72 335 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 BTRCQ9Y297 605 aa3.93□□□□□ -1.78
USP47-204ENST00000525078 IGHV2-26A0A0B4J1V2 119 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 CCL15-CCL14A0A0B4J2E2 113 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 GOLGA6L4A6NEF3 574 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 UPK1AO00322 258 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 COPEO14579 308 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 YIF1AO95070 293 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 INSP01308 110 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 ATP5G1P05496 136 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 RAB4BP61018 213 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 BTN3A2P78410 334 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 S100A12P80511 92 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 IFITM2Q01629 132 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 EMX1Q04741 257 aaPredicted RBP3.92□□□□□ -1.78
USP47-204ENST00000525078 CCL15Q16663 113 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 MPV17L2Q567V2 206 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 CLLU1OSQ5K130 101 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 ZC2HC1BQ5TFG8 222 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 FAM222AQ5U5X8 452 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 OTPQ5XKR4 325 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 ELP2Q6IA86 826 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 CLEC20AQ6ZU45 233 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms