RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 PHLDA2Q53GA4 152 aa12.96□□□□□ -0.34
BEST1-204ENST00000524926 PAN3Q58A45 887 aaKnown RBP12.96□□□□□ -0.34
BEST1-204ENST00000524926 C20orf204Q6ZNR8 217 aa12.96□□□□□ -0.34
BEST1-204ENST00000524926 OR8H3Q8N146 312 aa12.96□□□□□ -0.34
BEST1-204ENST00000524926 MRPL30Q8TCC3 161 aaKnown RBP12.96□□□□□ -0.34
BEST1-204ENST00000524926 MOB3AQ96BX8 217 aa12.96□□□□□ -0.34
BEST1-204ENST00000524926 ATP23Q9Y6H3 246 aa12.96□□□□□ -0.34
BEST1-204ENST00000524926 MPTX1A8MV57 137 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 TRDCB7Z8K6 153 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 PPYP01298 95 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 IFNA7P01567 189 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 GLAP06280 429 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 HOXB5P09067 269 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 ATXN7L3Q14CW9 347 aaPredicted RBP12.95□□□□□ -0.34
BEST1-204ENST00000524926 PRAMEF6Q5VXH4 476 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 VHLLQ6RSH7 139 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 RTN4IP1Q8WWV3 396 aaPredicted RBP12.95□□□□□ -0.34
BEST1-204ENST00000524926 GTF3AQ92664 365 aaKnown RBP12.95□□□□□ -0.34
BEST1-204ENST00000524926 IFT22Q9H7X7 185 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 UFSP2Q9NUQ7 469 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 OR14J1Q9UGF5 321 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 KCNIP3Q9Y2W7 256 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 SPEF1Q9Y4P9 236 aa12.95□□□□□ -0.34
BEST1-204ENST00000524926 SH2D1BO14796 132 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 DIRAS3O95661 229 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 CFDP00746 253 aaPredicted RBP12.94□□□□□ -0.34
BEST1-204ENST00000524926 RPA2P15927 270 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 CYCSP99999 105 aaKnown RBP12.94□□□□□ -0.34
BEST1-204ENST00000524926 EXOSC2Q13868 293 aaKnown RBP12.94□□□□□ -0.34
BEST1-204ENST00000524926 C11orf53Q8IXP5 236 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 SPERTQ8NA61 448 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 THAP6Q8TBB0 222 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 C1orf123Q9NWV4 160 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 RCC1P18754 421 aaPredicted RBP12.94□□□□□ -0.34
BEST1-204ENST00000524926 SP6Q3SY56 376 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 FIP1L1Q6UN15 594 aaKnown RBP12.94□□□□□ -0.34
BEST1-204ENST00000524926 LRP11Q86VZ4 500 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 SLC38A6Q8IZM9 456 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 PIK3IP1Q96FE7 263 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 NMES1Q9C002 83 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 PIGMQ9H3S5 423 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 TMEM165Q9HC07 324 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 SLC2A9Q9NRM0 540 aa12.94□□□□□ -0.34
BEST1-204ENST00000524926 CADP27708 2225 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 SLC33A1O00400 549 aaPredicted RBP12.93□□□□□ -0.34
BEST1-204ENST00000524926 PSMB6P28072 239 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 UCNP55089 124 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 UCP3P55916 312 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 HERPUD1Q15011 391 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 ZNF146Q15072 292 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 TMEM65Q6PI78 240 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 C22orf34Q6ZV56 151 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 POC1AQ8NBT0 407 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 OR2Z1Q8NG97 314 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 FAM210AQ96ND0 272 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 SYT3Q9BQG1 590 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 hCG_1807616A0A1W2PRN6 198 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 WNT9BO14905 357 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 RP2O75695 350 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 SLC25A4P12235 298 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 HOXA4Q00056 320 aaPredicted RBP12.93□□□□□ -0.34
BEST1-204ENST00000524926 MSMPQ1L6U9 139 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 MRGPRGQ86SM5 289 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 OR11L1Q8NGX0 322 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 OR10C1Q96KK4 312 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 NAA60Q9H7X0 242 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 RASL12Q9NYN1 266 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 GSKIPQ9P0R6 139 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 UBQLN2Q9UHD9 624 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 MAB21L2Q9Y586 359 aa12.93□□□□□ -0.34
BEST1-204ENST00000524926 CTXN2P0C2S0 81 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 S100A1P23297 94 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 CEBPDP49716 269 aaPredicted RBP12.92□□□□□ -0.34
BEST1-204ENST00000524926 SPIN3Q5JUX0 258 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 MBD2Q9UBB5 411 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 ZNF835Q9Y2P0 537 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 TRBV6-6A0A0A6YYG2 114 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 TRAV39A0A0B4J263 110 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 IGKV1-6A0A0C4DH72 117 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 HAND1O96004 215 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 ACAA1P09110 424 aaPredicted RBP12.92□□□□□ -0.34
BEST1-204ENST00000524926 OR5AC1P0C628 307 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 GLRXP35754 106 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 MDH2P40926 338 aaKnown RBP12.92□□□□□ -0.34
BEST1-204ENST00000524926 C3orf36Q3SXR2 165 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 WDR82Q6UXN9 313 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 SECTM1Q8WVN6 248 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 RSRP1Q9BUV0 290 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 GLS2Q9UI32 602 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 TNFSF18Q9UNG2 199 aa12.92□□□□□ -0.34
BEST1-204ENST00000524926 ATP6V1G2-DDX39BF2Z307 99 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 RBPJQ06330 500 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 MZT1Q08AG7 82 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 BEX5Q5H9J7 111 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 PRR18Q8N4B5 295 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 ZNF565Q8N9K5 539 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 PLPPR1Q8TBJ4 325 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 IL1F10Q8WWZ1 152 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 C2orf50Q96LR7 162 aa12.91□□□□□ -0.34
BEST1-204ENST00000524926 HES4Q9HCC6 221 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms