RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PIGYQ3MUY2 71 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 PAN3Q58A45 887 aaKnown RBP10.29□□□□□ -0.76
VEGFA-225ENST00000523950 BRD3OSQ6XYD6 125 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 BCL6BQ8N143 479 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-225ENST00000523950 SIGLECL1Q8N7X8 197 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 OR4D6Q8NGJ1 314 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 OR6M1Q8NGM8 313 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 C22orf15Q8WYQ4 148 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 CORO2AQ92828 525 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 BORCS5Q969J3 196 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 NKX3-1Q99801 234 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-225ENST00000523950 PPA2Q9H2U2 334 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 HEXA-AS1Q9H8Q6 139 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 SPACA1Q9HBV2 294 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 TAS2R3Q9NYW6 316 aa10.29□□□□□ -0.76
VEGFA-225ENST00000523950 TRGV10A0A0A0MS01 117 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 TRDV1A0A1B0GX56 115 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 RNASEK-C17orf49H0YIS7 233 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 CLDN34H7C241 214 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 OR7C1O76099 320 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-225ENST00000523950 VENTXO95231 258 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 CCL3L1P16619 93 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 PSMB9P28065 219 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 DLX6P56179 175 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 KRBOX4Q5JUW0 171 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 RUSC1-AS1Q66K80 236 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 TCF23Q7RTU1 214 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 C11orf42Q8N5U0 333 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 C1orf147Q96MC9 270 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-225ENST00000523950 ZNF48Q96MX3 618 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-225ENST00000523950 BARHL1Q9BZE3 327 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 PPIL3Q9H2H8 161 aaKnown RBP10.28□□□□□ -0.76
VEGFA-225ENST00000523950 GAL3ST2Q9H3Q3 398 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 OR6C3Q9NZP0 311 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 JMJD1CQ15652 2540 aa10.28□□□□□ -0.76
VEGFA-225ENST00000523950 TRAV1-2A0A0B4J238 106 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 TRAV24A0A0B4J272 114 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 ODAMA1E959 279 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 H3BMQ9 156 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 PDCD5O14737 125 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 GEMIN2O14893 280 aaKnown RBP10.27□□□□□ -0.77
VEGFA-225ENST00000523950 NPFFO15130 113 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 SLC22A1O15245 554 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 MGMTP16455 207 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 HTR2CP28335 458 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 AESQ08117 197 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 MIDNQ504T8 468 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 SYT6Q5T7P8 510 aaPredicted RBP10.27□□□□□ -0.77
VEGFA-225ENST00000523950 TRAPPC6BQ86SZ2 158 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 ZDHHC16Q969W1 377 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 COQ2Q96H96 371 aa10.27□□□□□ -0.77
VEGFA-225ENST00000523950 DPCDQ9BVM2 203 aaPredicted RBP10.27□□□□□ -0.77
VEGFA-225ENST00000523950 RCC2Q9P258 522 aaKnown RBP10.27□□□□□ -0.77
VEGFA-225ENST00000523950 A0A1W2PP11 408 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 RNF212BA8MTL3 300 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 SLC17A2O00624 439 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 CRTAPO75718 401 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-225ENST00000523950 CLPXO76031 633 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 BPNT1O95861 308 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 GLAP06280 429 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 FBP1P09467 338 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 IGHV1-8P0DP01 117 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 MYL9P24844 172 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 FGF9P31371 208 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-225ENST00000523950 BAMBIQ13145 260 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 KLRD1Q13241 179 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 RBM39Q14498 530 aaKnown RBP10.26□□□□□ -0.77
VEGFA-225ENST00000523950 ATXN7L3Q14CW9 347 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-225ENST00000523950 TAF9Q16594 264 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 DEFB112Q30KQ8 113 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 KRTAP24-1Q3LI83 254 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 GPR107Q5VW38 600 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 SLC35E4Q6ICL7 350 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 OR52W1Q6IF63 320 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 HCP5Q6MZN7 132 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 Q6YL49 198 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 LDLRAD3Q86YD5 345 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 ANKRD13BQ86YJ7 626 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 PIP4P2Q8N4L2 257 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 TMEM86BQ8N661 226 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 TPRX1Q8N7U7 411 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 ZDHHC22Q8N966 263 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 SUMF2Q8NBJ7 301 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 OR13D1Q8NGV5 346 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 KCNG3Q8TAE7 436 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 FAM216AQ8WUB2 273 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 Q96M66 194 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 STUB1Q9UNE7 303 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 FAM96BQ9Y3D0 163 aa10.26□□□□□ -0.77
VEGFA-225ENST00000523950 DNAJC9-AS1A6NH13 148 aa10.25□□□□□ -0.77
VEGFA-225ENST00000523950 ZNF729A6NN14 1252 aaPredicted RBP10.25□□□□□ -0.77
VEGFA-225ENST00000523950 HSPB6O14558 160 aa10.25□□□□□ -0.77
VEGFA-225ENST00000523950 CA11O75493 328 aa10.25□□□□□ -0.77
VEGFA-225ENST00000523950 CFPP27918 469 aa10.25□□□□□ -0.77
VEGFA-225ENST00000523950 SAA4P35542 130 aa10.25□□□□□ -0.77
VEGFA-225ENST00000523950 GLIPR1P48060 266 aa10.25□□□□□ -0.77
VEGFA-225ENST00000523950 SERPINB10P48595 397 aa10.25□□□□□ -0.77
VEGFA-225ENST00000523950 UBA52P62987 128 aaKnown RBP10.25□□□□□ -0.77
VEGFA-225ENST00000523950 ATAD3CQ5T2N8 411 aa10.25□□□□□ -0.77
VEGFA-225ENST00000523950 RSBN1Q5VWQ0 802 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms