RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	TMED9	Q9BVK6	235 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	NAA50	Q9GZZ1	169 aa	Known RBP	4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR51M1	Q9H341	326 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF556	Q9HAH1	456 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	TPT1P8	Q9HAU6	139 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	ACKR4	Q9NPB9	350 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	VNN3	Q9NY84	501 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	SLC25A37	Q9NYZ2	338 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	SIGLEC8	Q9NYZ4	499 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	C11orf21	Q9P2W6	132 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	SMPX	Q9UHP9	88 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	FZR1	Q9UM11	496 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	SLC22A7	Q9Y694	548 aa		4.25	□□□□□ -1.73
PABPC1-223	ENST00000523636	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636		A0A1W2PRG6	482 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	SLC22A20	A6NK97	555 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	LINC00587	B1AMM8	73 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	CLDN25	C9JDP6	229 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	C16orf97	H3BN30	126 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636		M0QZK8	103 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	SLC1A7	O00341	560 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	MED6	O75586	246 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR7A10	O76100	309 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	LRAT	O95237	230 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	CLIC3	O95833	236 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	ANGPTL1	O95841	491 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	CGA	P01215	116 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	IFNG	P01579	166 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	ORM1	P02763	201 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	IFNA4	P05014	189 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	CDK1	P06493	297 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	SLC35G4	P0C7Q5	338 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	LINC00614	P0C842	121 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	SMIM6	P0DI80	62 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	CCL3	P10147	92 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	SDC1	P18827	310 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	AADAC	P22760	399 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	OMG	P23515	440 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	ELK4	P28324	431 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR3A3	P47888	321 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	MEOX2	P50222	304 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	CRISP1	P54107	249 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	SMIM11A	P58511	58 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	SELENOW	P63302	87 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	FAM3A	P98173	230 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	IFITM2	Q01629	132 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	CD47	Q08722	323 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF415	Q09FC8	603 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	ST3GAL3	Q11203	375 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	RAB31	Q13636	194 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	POU2AF1	Q16633	256 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	TRIM16L	Q309B1	348 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	SPIN3	Q5JUX0	258 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	MED27	Q6P2C8	311 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	AGTRAP	Q6RW13	159 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF836	Q6ZNA1	936 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	SSX7	Q7RTT5	188 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR2W3	Q7Z3T1	314 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	MSRB3	Q8IXL7	192 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	NRM	Q8IXM6	262 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	LRRC25	Q8N386	305 aa	Predicted RBP	4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	RAB42	Q8N4Z0	105 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	APCDD1L	Q8NCL9	501 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	CCDC54	Q8NEL0	328 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	BPIFB6	Q8NFQ5	453 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR5L2	Q8NGL0	311 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR5AR1	Q8NGP9	310 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR1B1	Q8NGR6	318 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR9A4	Q8NGU2	314 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR11L1	Q8NGX0	322 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	PLPPR1	Q8TBJ4	325 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	TAMM41	Q96BW9	452 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	TMEM19	Q96HH6	336 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	FCRL1	Q96LA6	429 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	NOL4L	Q96MY1	436 aa	Predicted RBP	4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	UHRF2	Q96PU4	802 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	HBEGF	Q99075	208 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	STAC	Q99469	402 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	C12orf57	Q99622	126 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	EPYC	Q99645	322 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	FAM173A	Q9BQD7	235 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	DOHH	Q9BU89	302 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	BARHL1	Q9BZE3	327 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	DUSP21	Q9H596	190 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	IKZF5	Q9H5V7	419 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF665	Q9H7R5	613 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	BEX1	Q9HBH7	125 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	ISYNA1	Q9NPH2	558 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	IFT46	Q9NQC8	304 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	CTPS2	Q9NRF8	586 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	SLC2A9	Q9NRM0	540 aa		4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	YARS2	Q9Y2Z4	477 aa	Known RBP	4.24	□□□□□ -1.73
PABPC1-223	ENST00000523636	hCG_38984	A0A1B0GV85	526 aa		4.23	□□□□□ -1.73
PABPC1-223	ENST00000523636		A0A1W2PRF3	423 aa		4.23	□□□□□ -1.73
PABPC1-223	ENST00000523636		A0A1W2PRM7	423 aa		4.23	□□□□□ -1.73
PABPC1-223	ENST00000523636	SLC22A23	A1A5C7	686 aa		4.23	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR2M5	A3KFT3	312 aa		4.23	□□□□□ -1.73
PABPC1-223	ENST00000523636	PSMB11	A5LHX3	300 aa		4.23	□□□□□ -1.73

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