RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 TANC1Q9C0D5 1861 aa11.36□□□□□ -0.59
PCDHGB1-201ENST00000523390 AHRRA9YTQ3 701 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 PSMB3P49720 205 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 SUB1P53999 127 aaKnown RBP eCLIP11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 KLHDC3Q9BQ90 382 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 FAM24AA6NFZ4 105 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 NTN3O00634 580 aaPredicted RBP11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 CPN1P15169 458 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 UCP2P55851 309 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 RBM11P57052 281 aaKnown RBP11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 ADIRFQ15847 76 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 MOB3BQ86TA1 216 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 LFNGQ8NES3 379 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 NANPQ8TBE9 248 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 SLC2A9Q9NRM0 540 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 OPN4Q9UHM6 478 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 LOC102723996A0A087X1L8 192 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 CCL21O00585 134 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 HIST2H3PS2Q5TEC6 136 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 FNDC7Q5VTL7 733 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 TBC1D26Q86UD7 250 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 GAPTQ8N292 157 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 TPRX1Q8N7U7 411 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 MS4A7Q9GZW8 240 aaPredicted RBP11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 SAP30LQ9HAJ7 183 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 PCNX2A6NKB5 2137 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 SCAF4O95104 1147 aaKnown RBP11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 POLR2GP62487 172 aaKnown RBP eCLIP11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 BTNL3Q6UXE8 466 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 SLC25A42Q86VD7 318 aa11.35□□□□□ -0.59
PCDHGB1-201ENST00000523390 ABCA4P78363 2273 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 MST1P26927 711 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 PMELP40967 661 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 P2RY6Q15077 328 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 SURF2Q15527 256 aaPredicted RBP11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 LGALSLQ3ZCW2 172 aaPredicted RBP11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 RPUSD3Q6P087 351 aaKnown RBP11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 IL34Q6ZMJ4 242 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 ZNF837Q96EG3 531 aaPredicted RBP11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 IGHV3OR15-7A0A075B7D8 119 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 YIF1AO95070 293 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 DTYMKP23919 212 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 ACKR3P25106 362 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 ERHP84090 104 aaKnown RBP11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 HTD2P86397 168 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 TMEM267Q0VDI3 215 aaPredicted RBP11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 UBE2V2Q15819 145 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 SPINK9Q5DT21 86 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 STUMQ69YW2 141 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 FDX2Q6P4F2 183 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 HOGA1Q86XE5 327 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 MRPL24Q96A35 216 aaKnown RBP11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 SOX7Q9BT81 388 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 VSIG4Q9Y279 399 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 hADV38S2A0JD32 116 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 CD59P13987 128 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 COX7A1P24310 79 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 CCL8P80075 99 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 CEACAM21Q3KPI0 293 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 TMEM255AQ5JRV8 349 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 C10orf128Q5T292 105 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 FAHD2BQ6P2I3 314 aaPredicted RBP11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 CLEC9AQ6UXN8 241 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 ZNF826PQ6ZT77 177 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 ZNF441Q8N8Z8 693 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 ZNF485Q8NCK3 441 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 OR1K1Q8NGR3 316 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 FAHD2AQ96GK7 314 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 KIAA1456Q9P272 454 aa11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 ZNF107Q9UII5 783 aaPredicted RBP11.34□□□□□ -0.59
PCDHGB1-201ENST00000523390 UBE2L5PA0A1B0GUS4 154 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 MED19A0JLT2 244 aaPredicted RBP11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 SYNGR1O43759 233 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 RRASP10301 218 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 AESQ08117 197 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 ZNF260Q3ZCT1 412 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 CLLU1Q5K131 121 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 PRSS54Q6PEW0 395 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 FADS6Q8N9I5 356 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR11H4Q8NGC9 324 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR6C3Q9NZP0 311 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 URGCP-MRPS24S4R325 110 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 TP53BP1Q12888 1972 aaPredicted RBP11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 CRHP06850 196 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 UBAC2Q8NBM4 344 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 WNT2BQ93097 391 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 ONECUT1Q9UBC0 465 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 OSGIN2Q9Y236 505 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 PLXNA4Q9HCM2 1894 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 C7orf66A4D0T2 115 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 TLE1Q04724 770 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR5D13Q8NGL4 314 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR5C1Q8NGR4 320 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 VOPP1Q96AW1 172 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 LINC00052Q96N35 136 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 CA10Q9NS85 328 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 RNF7Q9UBF6 113 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 FBXL17Q9UF56 701 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR5G3P0C626 314 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms