RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 MRPL41Q8IXM3 137 aaKnown RBP12.23□□□□□ -0.45
MRPS28-209ENST00000522987 OSR2Q8N2R0 312 aa12.23□□□□□ -0.45
MRPS28-209ENST00000522987 UBALD1Q8TB05 177 aa12.23□□□□□ -0.45
MRPS28-209ENST00000522987 MRGPRDQ8TDS7 321 aa12.23□□□□□ -0.45
MRPS28-209ENST00000522987 RBMXL1Q96E39 390 aaKnown RBP12.23□□□□□ -0.45
MRPS28-209ENST00000522987 ZCCHC4Q9H5U6 513 aa12.23□□□□□ -0.45
MRPS28-209ENST00000522987 ISG20L2Q9H9L3 353 aaKnown RBP12.23□□□□□ -0.45
MRPS28-209ENST00000522987 CALYQ9NYX4 217 aa12.23□□□□□ -0.45
MRPS28-209ENST00000522987 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.23□□□□□ -0.45
MRPS28-209ENST00000522987 ZNF581Q9P0T4 197 aa12.23□□□□□ -0.45
MRPS28-209ENST00000522987 MYRFQ9Y2G1 1151 aa12.23□□□□□ -0.45
MRPS28-209ENST00000522987 FCGR1AP12314 374 aa12.22□□□□□ -0.45
MRPS28-209ENST00000522987 TMEM11P17152 192 aa12.22□□□□□ -0.45
MRPS28-209ENST00000522987 ZP1P60852 638 aa12.22□□□□□ -0.45
MRPS28-209ENST00000522987 TMED1Q13445 227 aa12.22□□□□□ -0.45
MRPS28-209ENST00000522987 KISS1Q15726 138 aa12.22□□□□□ -0.45
MRPS28-209ENST00000522987 FDX2Q6P4F2 183 aa12.22□□□□□ -0.45
MRPS28-209ENST00000522987 OR9G1Q8NH87 305 aa12.22□□□□□ -0.45
MRPS28-209ENST00000522987 PLPPR1Q8TBJ4 325 aa12.22□□□□□ -0.45
MRPS28-209ENST00000522987 PYDC1Q8WXC3 89 aa12.22□□□□□ -0.45
MRPS28-209ENST00000522987 CENPNQ96H22 339 aaPredicted RBP12.22□□□□□ -0.45
MRPS28-209ENST00000522987 IGHV3-72A0A0B4J1Y9 119 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 KBTBD11-OT1A0A1B0GTJ5 212 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 A0A1W2PPI3 338 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 E9PI62 339 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 J3QR06 171 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 J3QRE1 110 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 EI24O14681 340 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 CSN2P05814 226 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 FAM106CPP0CH98 169 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 SSTR5P35346 364 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 REG1BP48304 166 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 SOX2P48431 317 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 RAB25P57735 213 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 RPL23AP62750 156 aaKnown RBP12.21□□□□□ -0.45
MRPS28-209ENST00000522987 CD69Q07108 199 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 PIGYQ3MUY2 71 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 ZNF691Q5VV52 312 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 FAM53AQ6NSI3 398 aaPredicted RBP12.21□□□□□ -0.45
MRPS28-209ENST00000522987 CCDC144NLQ6NUI1 221 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 KCTD20Q7Z5Y7 419 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 ACBD7Q8N6N7 88 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 KLHL30-AS1Q8NEE0 82 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 TSEN15Q8WW01 171 aaKnown RBP12.21□□□□□ -0.45
MRPS28-209ENST00000522987 CREB3L1Q96BA8 519 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 LGALS12Q96DT0 336 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 GPER1Q99527 375 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 PDCD1LG2Q9BQ51 273 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 ALG8Q9BVK2 526 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 FAM192AQ9GZU8 254 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 AMBNQ9NP70 447 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 IDI2-AS1Q9NZ38 188 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 OR6C3Q9NZP0 311 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 PSG11Q9UQ72 335 aa12.21□□□□□ -0.45
MRPS28-209ENST00000522987 A0A087X0M5 115 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 TRAV24A0A0B4J272 114 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 A0A1B0GX30 115 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 LINC01548A6NM66 108 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 SERPINE3A8MV23 424 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 SULT1B1O43704 296 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 IGKV1D-33P01593 117 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 IGKV1-33P01594 117 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 MT-ND2P03891 347 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 CGB3P0DN86 165 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 CGB7P0DN87 165 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 CCR9P51686 369 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 LCNL1Q6ZST4 164 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 OR2W3Q7Z3T1 314 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 SAXO1Q8IYX7 474 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 C5orf56Q8N8D9 126 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 CHST4Q8NCG5 386 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 OR51A2Q8NGJ7 313 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 OR51T1Q8NGJ9 327 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 TNFAIP8L1Q8WVP5 186 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 DPF1Q92782 380 aa12.2□□□□□ -0.46
MRPS28-209ENST00000522987 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.2□□□□□ -0.466e-9■■■■■ 33.2
MRPS28-209ENST00000522987 AMMECR1Q9Y4X0 333 aaPredicted RBP12.2□□□□□ -0.46
MRPS28-209ENST00000522987 M0QZK8 103 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 GABRPO00591 440 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 ZFPL1O95159 310 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 HTR3BO95264 441 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 MTNR1BP49286 362 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 THBS3P49746 956 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 MOB3BQ86TA1 216 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 OR51D1Q8NGF3 324 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 CNIH3Q8TBE1 160 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 TFAP2CQ92754 450 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 TAS2R4Q9NYW5 299 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 DHDHQ9UQ10 334 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 ORC6Q9Y5N6 252 aa12.19□□□□□ -0.46
MRPS28-209ENST00000522987 FAM90A18PA6NE21 464 aa12.18□□□□□ -0.46
MRPS28-209ENST00000522987 FAM90A16PA6NEW6 464 aa12.18□□□□□ -0.46
MRPS28-209ENST00000522987 FAM90A20PA6NIJ5 464 aa12.18□□□□□ -0.46
MRPS28-209ENST00000522987 FAM90A9PA6NNJ1 464 aa12.18□□□□□ -0.46
MRPS28-209ENST00000522987 FAM90A12PA8MX19 464 aa12.18□□□□□ -0.46
MRPS28-209ENST00000522987 FAM90A5PA8MXJ8 464 aa12.18□□□□□ -0.46
MRPS28-209ENST00000522987 OOSP1A8MZH6 123 aa12.18□□□□□ -0.46
MRPS28-209ENST00000522987 E9PQ18 207 aa12.18□□□□□ -0.46
MRPS28-209ENST00000522987 CIB2O75838 187 aa12.18□□□□□ -0.46
MRPS28-209ENST00000522987 CDRT1O95170 752 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms