RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 COX7A2P2O60397 106 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 HRASP01112 189 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 CD74P04233 296 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 ARG1P05089 322 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 OR3A1P47881 315 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 ALKBH6Q3KRA9 238 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 NUFIP2Q7Z417 695 aaKnown RBP12.11□□□□□ -0.47
SYNPO-205ENST00000522122 HOGA1Q86XE5 327 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 ACY3Q96HD9 319 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 AMELYQ99218 206 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 TRDCB7Z8K6 153 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 CHST1O43916 411 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 ZNF205O95201 554 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 FOSL1P15407 271 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 ZP4Q12836 540 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 Q3ZCU0 254 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 FAM162BQ5T6X4 162 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 PRR27Q6MZM9 219 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 DHRS13Q6UX07 377 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 MEX3AA1L020 520 aaKnown RBP12.11□□□□□ -0.47
SYNPO-205ENST00000522122 DEFB108AA8MXU0 73 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 CDS2O95674 445 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 DYNLT3P51808 116 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 CNN1P51911 297 aaKnown RBP12.11□□□□□ -0.47
SYNPO-205ENST00000522122 ZXDAP98168 799 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 ETV3LQ6ZN32 361 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 ISOC2Q96AB3 205 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 GINS3Q9BRX5 216 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 OR2D2Q9H210 308 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 LIPGQ9Y5X9 500 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 THSD7BQ9C0I4 1608 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 C7orf77A4D0Y5 90 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 FAM74A7A6NL05 159 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 MT-CO3P00414 261 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 CCL3P10147 92 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 ATP6V1FQ16864 119 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 FAM74A3Q4VXF1 159 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 CLCF1Q9UBD9 225 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 TRAPPC1Q9Y5R8 145 aa12.11□□□□□ -0.47
SYNPO-205ENST00000522122 TRAV20A0A0B4J274 112 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 ZNF260Q3ZCT1 412 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 C1orf100Q5SVJ3 147 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 TMEM211Q6ICI0 200 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 LYZL2Q7Z4W2 148 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 SLC25A22Q9H936 323 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 KCNK7Q9Y2U2 307 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 MYOFQ9NZM1 2061 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 CDRT15L2A8MXV6 281 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 ST8SIA5O15466 376 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 RRP8O43159 456 aaKnown RBP12.1□□□□□ -0.47
SYNPO-205ENST00000522122 TNFRSF1AP19438 455 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 MPLP40238 635 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 PNRC1Q12796 327 aaPredicted RBP12.1□□□□□ -0.47
SYNPO-205ENST00000522122 C17orf78Q8N4C9 275 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 UBAC2Q8NBM4 344 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 MYOZ1Q9NP98 299 aaPredicted RBP12.1□□□□□ -0.47
SYNPO-205ENST00000522122 PARP11Q9NR21 331 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 ISG15P05161 165 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 CCL4P13236 92 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 GALR1P47211 349 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 IGLV3-21P80748 117 aaPredicted RBP12.1□□□□□ -0.47
SYNPO-205ENST00000522122 TRAT1Q6PIZ9 186 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 GAPTQ8N292 157 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 OR10G4Q8NGN3 311 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 OR10G9Q8NGN4 311 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 OR10G7Q8NGN6 311 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 ZNF835Q9Y2P0 537 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 KCNMB2Q9Y691 235 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 MKRN2OSH3BPM6 223 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 AP4M1O00189 453 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 MBPP02686 304 aaPredicted RBP12.1□□□□□ -0.47
SYNPO-205ENST00000522122 SPINK14Q6IE38 97 aa12.1□□□□□ -0.47
SYNPO-205ENST00000522122 IGLV1-36A0A0B4J1U3 117 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 HSBP1O75506 76 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 DAOP14920 347 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 CDC34P49427 236 aaPredicted RBP12.09□□□□□ -0.47
SYNPO-205ENST00000522122 TPPP2P59282 170 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 ZNRF4Q8WWF5 429 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 TMEM147Q9BVK8 224 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 TCFL5Q9UL49 500 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 AUP1Q9Y679 476 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 MFNGO00587 321 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 LYZL6O75951 148 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 FGF8P55075 233 aaPredicted RBP12.09□□□□□ -0.47
SYNPO-205ENST00000522122 LYG1Q8N1E2 194 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 RAB33BQ9H082 229 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 CCL28Q9NRJ3 127 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 CLEC3BP05452 202 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 SEC11BP0C7V7 166 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 KRTDAPP60985 99 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 ARL16Q0P5N6 197 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 FOXO1Q12778 655 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 MRGPRDQ8TDS7 321 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 ATP5SQ99766 215 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 OR2H1Q9GZK4 316 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 SLC2A8Q9NY64 477 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 FRMPD3Q5JV73 1810 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 DNPH1O43598 174 aa12.09□□□□□ -0.47
SYNPO-205ENST00000522122 SMIM6P0DI80 62 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms