RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 CSF1P09603 554 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 DUX4L2P0CJ85 424 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 DUX4L3P0CJ86 424 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 DUX4L4P0CJ87 422 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 DUX4L5P0CJ88 424 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 DUX4L6P0CJ89 424 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 DUX4L7P0CJ90 424 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 TMEM33P57088 247 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 DEFA1P59665 94 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 DEFA3P59666 94 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 AP3S2P59780 193 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 KRTAP10-9P60411 292 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 SHEQ5VZ18 495 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 DUX4L9Q6RFH8 374 aaPredicted RBP17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 FAM216BQ8N7L0 139 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 TMEM185AQ8NFB2 350 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 DUX4Q9UBX2 424 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 DYSFO75923 2080 aa17.83■□□□□ 0.45
R3HCC1-208ENST00000522012 SSX4O60224 188 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 IGHV2-70P01814 119 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 SELLP14151 372 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 DTYMKP23919 212 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 HLA-DMAP28067 261 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 KCNJ3P48549 501 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 IL13RA1P78552 427 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 AESQ08117 197 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 KLF9Q13886 244 aaPredicted RBP17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 OR52W1Q6IF63 320 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 LYPD2Q6UXB3 125 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 HOGA1Q86XE5 327 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 POC5Q8NA72 575 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 OR4K15Q8NH41 348 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 MED30Q96HR3 178 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 COX4I2Q96KJ9 171 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 DNTTIP1Q9H147 329 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 RIMS4Q9H426 269 aaPredicted RBP17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 TBC1D24Q9ULP9 559 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 K7N7A8 449 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 TNFRSF13BO14836 293 aaPredicted RBP17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 SIGLEC5O15389 551 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 PLA2G10O15496 165 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 ADAM20O43506 726 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 NDUFA2O43678 99 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 NAPSAO96009 420 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 TK1P04183 234 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 EDDM3AQ14507 147 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 ZNF497Q6ZNH5 498 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 SLC36A1Q7Z2H8 476 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 TMEM229BQ8NBD8 167 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 MRPL30Q8TCC3 161 aaKnown RBP17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 CCDC107Q8WV48 283 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 ANAPC10Q9UM13 185 aa17.82■□□□□ 0.44
R3HCC1-208ENST00000522012 TMEM30CPA0ZSE6 113 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 ZNF736B4DX44 427 aaPredicted RBP17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 H7C1Q1 480 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 MGST3O14880 152 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 FSTL3O95633 263 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 MT-ND4P03905 459 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 ATP5J2P56134 94 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 TAS2R19P59542 299 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 KRBOX4Q5JUW0 171 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 RSBN1Q5VWQ0 802 aaPredicted RBP17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 MUC20Q8N307 709 aaPredicted RBP17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 ZNF525Q8N782 197 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 BEST4Q8NFU0 473 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 OR5D13Q8NGL4 314 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 SNAPC3Q92966 411 aa17.81■□□□□ 0.44
R3HCC1-208ENST00000522012 UTP20O75691 2785 aaKnown RBP17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 CD3DP04234 171 aa17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 CSN2P05814 226 aa17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 GPR6P46095 362 aaPredicted RBP17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 ASAH1Q13510 395 aa17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 SLC35E4Q6ICL7 350 aa17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 Q6ZPA2 131 aa17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 GDPD3Q7L5L3 318 aa17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 COQ2Q96H96 371 aa17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 FAM234AQ9H0X4 552 aa17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 ZNF107Q9UII5 783 aaPredicted RBP17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 TRAPPC2LQ9UL33 140 aa17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 EDARQ9UNE0 448 aa17.8■□□□□ 0.44
R3HCC1-208ENST00000522012 TRAV39A0A0B4J263 110 aa17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 NAT1P18440 290 aa17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 GLIPR1P48060 266 aa17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 DYRK1AQ13627 763 aa17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 STEAP1BQ6NZ63 245 aa17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 TPRX1Q8N7U7 411 aa17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 PERPQ96FX8 193 aa17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 C11orf54Q9H0W9 315 aaPredicted RBP17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 BARX1Q9HBU1 254 aaPredicted RBP17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 HRASLSQ9HDD0 168 aa17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 Q9N2K0 584 aa17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 KIF25Q9UIL4 384 aa17.79■□□□□ 0.44
R3HCC1-208ENST00000522012 IGKV1D-8A0A087WSZ0 117 aa17.78■□□□□ 0.44
R3HCC1-208ENST00000522012 MEIKINA0A087WXM9 373 aa17.78■□□□□ 0.44
R3HCC1-208ENST00000522012 TRBV6-6A0A0A6YYG2 114 aa17.78■□□□□ 0.44
R3HCC1-208ENST00000522012 CENPXA8MT69 81 aa17.78■□□□□ 0.44
R3HCC1-208ENST00000522012 M0QYG6 137 aa17.78■□□□□ 0.44
R3HCC1-208ENST00000522012 LYRM1O43325 122 aa17.78■□□□□ 0.44
R3HCC1-208ENST00000522012 NDUFB3O43676 98 aa17.78■□□□□ 0.44
R3HCC1-208ENST00000522012 RAB3DO95716 219 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms