RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 ZNF561Q8N587 486 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 OR5D18Q8NGL1 313 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 OR1J1Q8NGS3 322 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 LYPD6BQ8NI32 183 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 RXFP4Q8TDU9 374 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 NPRL2Q8WTW4 380 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 SFT2D1Q8WV19 159 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 ROBO4Q8WZ75 1007 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 RELTQ969Z4 430 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 C14orf79Q96F83 325 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 PIGQQ9BRB3 760 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 SLC25A31Q9H0C2 315 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 ACKR4Q9NPB9 350 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 C19orf12Q9NSK7 152 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 FAM96BQ9Y3D0 163 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 FBN2P35556 2912 aa7.47□□□□□ -1.21
CTNNA1-223ENST00000520520 CELSR1Q9NYQ6 3014 aa7.46□□□□□ -1.21
CTNNA1-223ENST00000520520 FREM3P0C091 2139 aa7.46□□□□□ -1.21
CTNNA1-223ENST00000520520 ADGRG4Q8IZF6 3080 aa7.46□□□□□ -1.21
CTNNA1-223ENST00000520520 DOCK10Q96BY6 2186 aa7.46□□□□□ -1.21
CTNNA1-223ENST00000520520 ABCA12Q86UK0 2595 aa7.46□□□□□ -1.21
CTNNA1-223ENST00000520520 LOC102723996A0A087X1L8 192 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 NSG1A0A0A6YYJ2 146 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 A0A1W2PP11 408 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 OR6C6A6NF89 314 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 HSPA12AO43301 675 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 XRCC2O43543 280 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 EFNA2O43921 213 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 DIRAS3O95661 229 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 CRYBA1P05813 215 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 DANCRP0C864 163 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 MMP9P14780 707 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 COX6B1P14854 86 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 ZNF14P17017 642 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 RCC1P18754 421 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 KCNJ3P48549 501 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 SSR4P51571 173 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 FUT6P51993 359 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 SOX8P57073 446 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 PMP22Q01453 160 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 UBE2V2Q15819 145 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 GUK1Q16774 197 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 MIDNQ504T8 468 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 FAM27BQ5VT28 67 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 RPUSD3Q6P087 351 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 DHRS11Q6UWP2 260 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 MRGPRGQ86SM5 289 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 C20orf196Q8IYI0 205 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 TMEM123Q8N131 208 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 OSR2Q8N2R0 312 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 M1APQ8TC57 530 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 RTN4IP1Q8WWV3 396 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 TOMM40LQ969M1 308 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 MRPL24Q96A35 216 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 NABP1Q96AH0 204 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 MOB3AQ96BX8 217 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 REEP6Q96HR9 211 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 LYZL4Q96KX0 146 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 TAAR6Q96RI8 345 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 RBM24Q9BX46 236 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 EGLN1Q9GZT9 426 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 KCNJ16Q9NPI9 418 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 RPS10P5Q9NQ39 176 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 COA4Q9NYJ1 87 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 ZNF319Q9P2F9 582 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 CACFD1Q9UGQ2 172 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 AK3Q9UIJ7 227 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 AMDHD2Q9Y303 409 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 STARD10Q9Y365 291 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 TIMM10BQ9Y5J6 103 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 AKAP9Q99996 3911 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 ZGRF1Q86YA3 2104 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 SVILO95425 2214 aa7.46□□□□□ -1.22
CTNNA1-223ENST00000520520 APCP25054 2843 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 SEC16AO15027 2179 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 FAM230AA0A1W2PPH8 454 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 OR5H15A6NDH6 313 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 A6NJY4 79 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 M0R036 132 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 KCNAB3O43448 404 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 PDCD6O75340 191 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 PITX3O75364 302 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 IFNA17P01571 189 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 HBE1P02100 147 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 GLAP06280 429 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 ZNF44P15621 663 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 SNCAP37840 140 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 UCP2P55851 309 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 RIPPLY3P57055 190 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 RAC1P63000 192 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 VAMP2P63027 116 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 SRSF3P84103 164 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 H3F3AP84243 136 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 BAXQ07812 192 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 TMEM187Q14656 261 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 SRSF7Q16629 238 aaKnown RBP eCLIP7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 AWAT1Q58HT5 328 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 TMEM211Q6ICI0 200 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 SLC22A25Q6T423 547 aa7.45□□□□□ -1.22
CTNNA1-223ENST00000520520 IGFL2Q6UWQ7 119 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms