RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 LOC100506127A0A0U1RQW1 187 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 LINC00587B1AMM8 73 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 SMLR1H3BR10 107 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 M0QYV0 167 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 CXCR6O00574 342 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 NUPL2O15504 423 aaKnown RBP5.11□□□□□ -1.59
LSM1-202ENST00000520286 CHP2O43745 196 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 ORC5O43913 435 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 ICOSLGO75144 302 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 PTHP01270 115 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 TNNC2P02585 160 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 IGHV4-34P06331 123 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 OR56A5P0C7T3 313 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 SMIM10L1P0DMW3 83 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 PIPP12273 146 aaPredicted RBP5.11□□□□□ -1.59
LSM1-202ENST00000520286 ZNF19P17023 458 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 GGT2P36268 569 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 TNFSF9P41273 254 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 NCBP2P52298 156 aaKnown RBP eCLIP5.11□□□□□ -1.596e-6■■■■□ 21.3
LSM1-202ENST00000520286 ARPP19P56211 112 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 KRTAP1-1Q07627 177 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 UNC119Q13432 240 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 OR7A5Q15622 319 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 ZNF621Q6ZSS3 439 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 RPS27LQ71UM5 84 aaKnown RBP5.11□□□□□ -1.59
LSM1-202ENST00000520286 OAFQ86UD1 273 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 FAM71E2Q8N5Q1 922 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 PROKR2Q8NFJ6 384 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 CREB3L1Q96BA8 519 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 FAM3DQ96BQ1 224 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 SMIM10Q96HG1 83 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 KCNS3Q9BQ31 491 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 MED18Q9BUE0 208 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 TREX1Q9NSU2 369 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 SDHAF2Q9NX18 166 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 EMC3Q9P0I2 261 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 ZNF225Q9UK10 706 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 LSM2Q9Y333 95 aaKnown RBP5.11□□□□□ -1.59
LSM1-202ENST00000520286 ZNF292O60281 2723 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 PTPRSQ13332 1948 aa5.11□□□□□ -1.59
LSM1-202ENST00000520286 TRAV6A0A075B6T7 132 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 A0A096LPI6 279 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 A0A1W2PRD5 423 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 GABRR3A8MPY1 467 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 SMKR1H3BMG3 65 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 DFFAO00273 331 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 GNGT2O14610 69 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 FABP7O15540 132 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 LYRM1O43325 122 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 IFNA4P05014 189 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 CT45A6P0DMU7 189 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 CT45A5P0DMU8 189 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 CT45A7P0DMV0 189 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 ARL2P36404 184 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 RAB13P51153 203 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 FOXA1P55317 472 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 MTPNP58546 118 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 GGTLC2Q14390 218 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 NCF4Q15080 339 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 ZNF726P1Q15940 193 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 Q3ZCU0 254 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 CT45A1Q5HYN5 189 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 OR2T5Q6IEZ7 315 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 MICAL3Q7RTP6 2002 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 APRG1Q8IVJ8 170 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 MSRB3Q8IXL7 192 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 LRRC75AQ8NAA5 344 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 OR2T4Q8NH00 348 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 OR2T29Q8NH02 315 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 OR6X1Q8NH79 312 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 CT45A3Q8NHU0 189 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 TEX47Q8TBZ9 253 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 CA5BP1Q8WTZ4 195 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 IL22RA2Q969J5 263 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 PYURFQ96I23 114 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 TSSK3Q96PN8 268 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 VAT1Q99536 393 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 SEC22CQ9BRL7 303 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 MRPL37Q9BZE1 423 aaKnown RBP5.1□□□□□ -1.59
LSM1-202ENST00000520286 POPDC3Q9HBV1 291 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 DEC1Q9P2X7 70 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 ZNF629Q9UEG4 869 aaPredicted RBP5.1□□□□□ -1.59
LSM1-202ENST00000520286 MRPS18BQ9Y676 258 aaKnown RBP5.1□□□□□ -1.59
LSM1-202ENST00000520286 DNAH14Q0VDD8 3507 aa5.1□□□□□ -1.59
LSM1-202ENST00000520286 MYO7AQ13402 2215 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 PRSS37A4D1T9 235 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 INMT-MINDY4F8WBC2 141 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 G3V3Q6 166 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 SIVA1O15304 175 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 CFDP00746 253 aaPredicted RBP5.09□□□□□ -1.59
LSM1-202ENST00000520286 DCNP07585 359 aaKnown RBP5.09□□□□□ -1.59
LSM1-202ENST00000520286 SMIM6P0DI80 62 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 CD82P27701 267 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 CRISP3P54108 245 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 RAB14P61106 215 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 ZNF33AQ06730 810 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 PSG7Q13046 419 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 PON3Q15166 354 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 PSG5Q15238 335 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 LGALSLQ3ZCW2 172 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms