RNA–Protein interactions for RNA: ENST00000519336.1

LINC01339-203, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3 BASIC

Gene LINC01339, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-203ENST00000519336 CDC40O60508 579 aaKnown RBP eCLIP3.44□□□□□ -1.86
LINC01339-203ENST00000519336 E2F6O75461 281 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 CBR3O75828 277 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 OR5F1O95221 314 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 C1QCP02747 245 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 ALDOBP05062 364 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 CCL3P10147 92 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 ZNF17P17021 662 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 FKBP2P26885 142 aaKnown RBP3.44□□□□□ -1.86
LINC01339-203ENST00000519336 IFNGR2P38484 337 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 EIF1P41567 113 aaKnown RBP3.44□□□□□ -1.86
LINC01339-203ENST00000519336 YAP1P46937 504 aaKnown RBP3.44□□□□□ -1.86
LINC01339-203ENST00000519336 POLR2HP52434 150 aaKnown RBP3.44□□□□□ -1.86
LINC01339-203ENST00000519336 PRRX1P54821 245 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 DSCR4P56555 118 aaPredicted RBP3.44□□□□□ -1.86
LINC01339-203ENST00000519336 ZNF117Q03924 483 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 DMTNQ08495 405 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 SKP2Q13309 424 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 MAPK14Q16539 360 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 RAET1LQ5VY80 246 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 OTPQ5XKR4 325 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 SLC25A25Q6KCM7 469 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 IGFL2Q6UWQ7 119 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 C5orf46Q6UWT4 87 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 IGFL3Q6UXB1 125 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 VTCN1Q7Z7D3 282 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 MARCH3Q86UD3 253 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 PLCZ1Q86YW0 608 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 PUSL1Q8N0Z8 303 aaKnown RBP3.44□□□□□ -1.86
LINC01339-203ENST00000519336 LINC00471Q8N535 108 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 GATSQ8NAP1 163 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 MDS2Q8NDY4 140 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 CCDC54Q8NEL0 328 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 OR2M7Q8NG81 312 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 OR5W2Q8NH69 310 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 PLPPR1Q8TBJ4 325 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 PHF10Q8WUB8 498 aaKnown RBP3.44□□□□□ -1.86
LINC01339-203ENST00000519336 ACOT11Q8WXI4 607 aaPredicted RBP3.44□□□□□ -1.86
LINC01339-203ENST00000519336 DUS3LQ96G46 650 aaKnown RBP3.44□□□□□ -1.86
LINC01339-203ENST00000519336 PRRC1Q96M27 445 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 RARRES2Q99969 163 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 TMEM246Q9BRR3 403 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 VCXQ9H320 206 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 VCX3BQ9H321 246 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 REEP1Q9H902 201 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 C12orf10Q9HB07 376 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 ARMC1Q9NVT9 282 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 CALYQ9NYX4 217 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 PITPNC1Q9UKF7 332 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 AP4S1Q9Y587 144 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 ORC6Q9Y5N6 252 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 CHCHD2Q9Y6H1 151 aaPredicted RBP3.44□□□□□ -1.86
LINC01339-203ENST00000519336 ENPP4Q9Y6X5 453 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 KIF25-AS1Q9Y6Z4 181 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 FREM2Q5SZK8 3169 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 FRYQ5TBA9 3013 aa3.44□□□□□ -1.86
LINC01339-203ENST00000519336 CACNA1AO00555 2505 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 FREM3P0C091 2139 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 RAI1Q7Z5J4 1906 aaPredicted RBP3.43□□□□□ -1.86
LINC01339-203ENST00000519336 A0A075B6Q4 140 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 PSMB11A5LHX3 300 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 TRAPPC13A5PLN9 417 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 CPSF4LA6NMK7 179 aaKnown RBP3.43□□□□□ -1.86
LINC01339-203ENST00000519336 ANKRD65E5RJM6 399 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 hCG_2039718K7EN88 272 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 CLOCKO15516 846 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 CHP2O43745 196 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 TPST1O60507 370 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 ENTPD5O75356 428 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 GCM2O75603 506 aaPredicted RBP3.43□□□□□ -1.86
LINC01339-203ENST00000519336 TRAPPC6AO75865 159 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 GADD45GO95257 159 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 CRYGBP07316 175 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 GKN3PP0CG01 181 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 CHTF8P0CG12 524 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 CXCR1P25024 350 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 ELK4P28324 431 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 GTF2E2P29084 291 aaKnown RBP3.43□□□□□ -1.86
LINC01339-203ENST00000519336 RRM2P31350 389 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 VHLP40337 213 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 RBM34P42696 430 aaKnown RBP3.43□□□□□ -1.86
LINC01339-203ENST00000519336 MAGEA2P43356 314 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 OR1E2P47887 323 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 IDH2P48735 452 aaKnown RBP3.43□□□□□ -1.86
LINC01339-203ENST00000519336 DNASE1L1P49184 302 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 ELF3P78545 371 aaPredicted RBP3.43□□□□□ -1.86
LINC01339-203ENST00000519336 MERTKQ12866 999 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 SELENBP1Q13228 472 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 TRAM2Q15035 370 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 QPRTQ15274 297 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 OR2T5Q6IEZ7 315 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 LCN12Q6JVE5 192 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 C3orf33Q6P1S2 294 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 ULK3Q6PHR2 472 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 TTC33Q6PID6 262 aaPredicted RBP3.43□□□□□ -1.86
LINC01339-203ENST00000519336 METAP1DQ6UB28 335 aaPredicted RBP3.43□□□□□ -1.86
LINC01339-203ENST00000519336 OLIG3Q7RTU3 272 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 GRINAQ7Z429 371 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 HMGN2P46Q86SG4 172 aa3.43□□□□□ -1.86
LINC01339-203ENST00000519336 OFCC1Q8IZS5 231 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms