RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 IGLV5-45A0A087WSX0 123 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 IGKV3D-15A0A087WSY6 115 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 MEIKINA0A087WXM9 373 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 A0A0A6YYH2 397 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 A0A0U1RQV5 110 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 SPAARA0A1B0GVQ0 90 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 TMEM235A6NFC5 223 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 A6NJ64 397 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 FOXI3A8MTJ6 420 aaPredicted RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 M0R135 149 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 SULT1C2O00338 296 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 SSX5O60225 188 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 NME2P1O60361 137 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 TRAPPC6AO75865 159 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 DHFRP00374 187 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 TGFAP01135 160 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 CD74P04233 296 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 CD3DP04234 171 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 IL5P05113 134 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 FCER2P06734 321 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 ZNF735P0CB33 412 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 GSTT2P0CG29 244 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 GSTT2BP0CG30 244 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 GTF2F2P13984 249 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 B4GALT1P15291 398 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 ZNF708P17019 499 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 CXCL3P19876 107 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 PSMB1P20618 241 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 CDKN1AP38936 164 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 MAGEA5P43359 124 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 HOXA1P49639 335 aaPredicted RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 PDLIM4P50479 330 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 DVL1P1P54792 670 aaPredicted RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 CARD18P57730 90 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 MRPS15P82914 257 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 SSBP1Q04837 148 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 CDK10Q15131 360 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 TGIF1Q15583 401 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 C3AR1Q16581 482 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 RIPPLY2Q5TAB7 128 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 FAM27BQ5VT28 67 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 SLC25A25Q6KCM7 469 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 ZNF774Q6NX45 483 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 AAED1Q7RTV5 226 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 OR2W3Q7Z3T1 314 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 NAA40Q86UY6 237 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 VASH2Q86V25 355 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 GABRG1Q8N1C3 465 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 LRRC18Q8N456 261 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 C9orf62Q8N4C0 152 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 TMEM104Q8NE00 496 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 BEST4Q8NFU0 473 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 AKR7LQ8NHP1 331 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 NUDCD2Q8WVJ2 157 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 DEDD2Q8WXF8 326 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 CPNE4Q96A23 557 aaPredicted RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 TMEM186Q96B77 213 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 SEH1LQ96EE3 360 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 ZNF799Q96GE5 643 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 NICN1Q9BSH3 213 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 ALKBH7Q9BT30 221 aaPredicted RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 RBM24Q9BX46 236 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 CHST5Q9GZS9 411 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 LPAR5Q9H1C0 372 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 MED28Q9H204 178 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 CRLF2Q9HC73 371 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 GPN1Q9HCN4 374 aaPredicted RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 DIABLOQ9NR28 239 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 CA10Q9NS85 328 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 B3GNT2Q9NY97 397 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 STMN3Q9NZ72 180 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 RAB22AQ9UL26 194 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 ANAPC10Q9UM13 185 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 MRPS28Q9Y2Q9 187 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 NCOA6Q14686 2063 aaPredicted RBP4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 KNTC1P50748 2209 aa4.05□□□□□ -1.76
CTNNA1-212ENST00000518919 FAM172BPA6NC97 362 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 ARGFXA6NJG6 315 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 F5H5K5 113 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 FABP7O15540 132 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 AKR7A2O43488 359 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 SGCEO43556 437 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 RBBP9O75884 186 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 DHRS3O75911 302 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 TGM6O95932 706 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 ERCC1P07992 297 aaPredicted RBP4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 MELTFP08582 738 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 MMP7P09237 267 aaPredicted RBP4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 PATE4P0C8F1 98 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 AKAIN1P0CW23 69 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 IGHV4-31P0DP07 118 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 ANXA3P12429 323 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 ZNF32P17041 273 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 ACKR3P25106 362 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 ERP29P30040 261 aaKnown RBP4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 PRSS3P35030 304 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 FAUP35544 74 aaKnown RBP4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 ZNF93P35789 620 aaPredicted RBP4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 HTR5AP47898 357 aa4.04□□□□□ -1.76
CTNNA1-212ENST00000518919 FOXG1P55316 489 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms