RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 ANKRD60Q9BZ19 345 aa19.93■□□□□ 0.78
PVT1-204ENST00000517525 VCX3BQ9H321 246 aa19.93■□□□□ 0.78
PVT1-204ENST00000517525 DUSP21Q9H596 190 aa19.93■□□□□ 0.78
PVT1-204ENST00000517525 LINC00574Q9H8X3 128 aa19.93■□□□□ 0.78
PVT1-204ENST00000517525 RNF114Q9Y508 228 aa19.93■□□□□ 0.78
PVT1-204ENST00000517525 A0A087X0M5 115 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 A0A1B0GX30 115 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 MMP23AO75900 390 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 CDRT1O95170 752 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 SLC35A2P78381 396 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 GPR176Q14439 515 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 IRF3Q14653 427 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 DYNAPQ8N1N2 210 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 OSR2Q8N2R0 312 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 MS4A15Q8N5U1 240 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 FAM192AQ9GZU8 254 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 FBLN5Q9UBX5 448 aa19.92■□□□□ 0.78
PVT1-204ENST00000517525 LSM2Q9Y333 95 aaKnown RBP19.92■□□□□ 0.78
PVT1-204ENST00000517525 ZNF729A6NN14 1252 aaPredicted RBP19.91■□□□□ 0.78
PVT1-204ENST00000517525 PIN1P1O15428 100 aa19.91■□□□□ 0.78
PVT1-204ENST00000517525 HTR3BO95264 441 aa19.91■□□□□ 0.78
PVT1-204ENST00000517525 MAPK3P27361 379 aaPredicted RBP19.91■□□□□ 0.78
PVT1-204ENST00000517525 RBM11P57052 281 aaKnown RBP19.91■□□□□ 0.78
PVT1-204ENST00000517525 GPR50Q13585 617 aa19.91■□□□□ 0.78
PVT1-204ENST00000517525 PIGYQ3MUY2 71 aa19.91■□□□□ 0.78
PVT1-204ENST00000517525 PAN3Q58A45 887 aaKnown RBP19.91■□□□□ 0.78
PVT1-204ENST00000517525 UNQ9370/PRO34162Q6UXP9 181 aa19.91■□□□□ 0.78
PVT1-204ENST00000517525 DTX3Q8N9I9 347 aa19.91■□□□□ 0.78
PVT1-204ENST00000517525 OR10K1Q8NGX5 313 aa19.91■□□□□ 0.78
PVT1-204ENST00000517525 MRPS24Q96EL2 167 aaKnown RBP19.91■□□□□ 0.78
PVT1-204ENST00000517525 NR1H4Q96RI1 486 aaPredicted RBP19.91■□□□□ 0.78
PVT1-204ENST00000517525 CITED1Q99966 193 aa19.91■□□□□ 0.78
PVT1-204ENST00000517525 BARHL1Q9BZE3 327 aa19.91■□□□□ 0.78
PVT1-204ENST00000517525 RANBP3Q9H6Z4 567 aaPredicted RBP19.91■□□□□ 0.78
PVT1-204ENST00000517525 ING4Q9UNL4 249 aa19.91■□□□□ 0.78
PVT1-204ENST00000517525 ST3GAL6Q9Y274 331 aa19.91■□□□□ 0.78
PVT1-204ENST00000517525 MAGEA13PA6NCF6 341 aa19.9■□□□□ 0.78
PVT1-204ENST00000517525 PTGES3LE9PB15 166 aa19.9■□□□□ 0.78
PVT1-204ENST00000517525 H0YHG0 523 aa19.9■□□□□ 0.78
PVT1-204ENST00000517525 CSTBP04080 98 aaKnown RBP19.9■□□□□ 0.78
PVT1-204ENST00000517525 CDK2P24941 298 aa19.9■□□□□ 0.78
PVT1-204ENST00000517525 ATXN7L3Q14CW9 347 aaPredicted RBP19.9■□□□□ 0.78
PVT1-204ENST00000517525 MPV17LQ2QL34 196 aa19.9■□□□□ 0.78
PVT1-204ENST00000517525 ZNF565Q8N9K5 539 aa19.9■□□□□ 0.78
PVT1-204ENST00000517525 S100A13Q99584 98 aa19.9■□□□□ 0.78
PVT1-204ENST00000517525 TPRKBQ9Y3C4 175 aa19.9■□□□□ 0.78
PVT1-204ENST00000517525 KBTBD11-OT1A0A1B0GTJ5 212 aa19.89■□□□□ 0.77
PVT1-204ENST00000517525 KIR2DS4P43632 304 aa19.89■□□□□ 0.77
PVT1-204ENST00000517525 HSPA13P48723 471 aa19.89■□□□□ 0.77
PVT1-204ENST00000517525 DYNC1I2Q13409 638 aaKnown RBP19.89■□□□□ 0.77
PVT1-204ENST00000517525 SPHARQ15513 63 aa19.89■□□□□ 0.77
PVT1-204ENST00000517525 C17orf58Q2M2W7 97 aa19.89■□□□□ 0.77
PVT1-204ENST00000517525 RSBN1Q5VWQ0 802 aaPredicted RBP19.89■□□□□ 0.77
PVT1-204ENST00000517525 ABHD12Q8N2K0 398 aa19.89■□□□□ 0.77
PVT1-204ENST00000517525 OR4P4Q8NGL7 312 aa19.89■□□□□ 0.77
PVT1-204ENST00000517525 NKX3-1Q99801 234 aaPredicted RBP19.89■□□□□ 0.77
PVT1-204ENST00000517525 PPIL3Q9H2H8 161 aaKnown RBP19.89■□□□□ 0.77
PVT1-204ENST00000517525 KIAA2026Q5HYC2 2103 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 PNMA8CA0A1B0GUJ8 204 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 MEGF11A6BM72 1044 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 IGLV1-47P01700 117 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 GTF2F2P13984 249 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 PAX6P26367 422 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 HTR1DP28221 377 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 SSX2Q16385 188 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 PRAMEF5Q5TYX0 476 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 SLC35E4Q6ICL7 350 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 NKAIN3Q8N8D7 197 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 OR4D6Q8NGJ1 314 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 ZNF596Q8TC21 504 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 UQCC2Q9BRT2 126 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 DPCDQ9BVM2 203 aaPredicted RBP19.88■□□□□ 0.77
PVT1-204ENST00000517525 KIF25Q9UIL4 384 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 TCF19Q9Y242 345 aa19.88■□□□□ 0.77
PVT1-204ENST00000517525 ERICH4A6NGS2 130 aa19.87■□□□□ 0.77
PVT1-204ENST00000517525 LY6EQ16553 131 aa19.87■□□□□ 0.77
PVT1-204ENST00000517525 C11orf88Q6PI97 169 aa19.87■□□□□ 0.77
PVT1-204ENST00000517525 SUMF2Q8NBJ7 301 aa19.87■□□□□ 0.77
PVT1-204ENST00000517525 OR10A7Q8NGE5 316 aa19.87■□□□□ 0.77
PVT1-204ENST00000517525 CREB3L1Q96BA8 519 aa19.87■□□□□ 0.77
PVT1-204ENST00000517525 OR5M11Q96RB7 305 aa19.87■□□□□ 0.77
PVT1-204ENST00000517525 DPM3Q9P2X0 92 aa19.87■□□□□ 0.77
PVT1-204ENST00000517525 PITPNC1Q9UKF7 332 aa19.87■□□□□ 0.77
PVT1-204ENST00000517525 A0A1W2PPK0 400 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 A6NDX4 124 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 FAM90A22PA8MWA6 464 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 NPIPB11E5RHQ5 1161 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 GEMIN2O14893 280 aaKnown RBP19.86■□□□□ 0.77
PVT1-204ENST00000517525 SC5DO75845 299 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 GDNFP39905 211 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 KRTAP10-3P60369 221 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 FAM189A2Q15884 450 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 SLC22A6Q4U2R8 563 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 PLPPR1Q8TBJ4 325 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 PHYHIPQ92561 330 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 SGCDQ92629 289 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 ISYNA1Q9NPH2 558 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 ABCB10Q9NRK6 738 aa19.86■□□□□ 0.77
PVT1-204ENST00000517525 MRPS28Q9Y2Q9 187 aaKnown RBP19.86■□□□□ 0.77
PVT1-204ENST00000517525 TRRAPQ9Y4A5 3859 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms