RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 OR5B12Q96R08 314 aa-2.57□□□□□ -2.82
RNU6-542P-201ENST00000516405 SPRR2FQ96RM1 72 aa-2.57□□□□□ -2.82
RNU6-542P-201ENST00000516405 MTG1Q9BT17 334 aaPredicted RBP-2.57□□□□□ -2.82
RNU6-542P-201ENST00000516405 PPA2Q9H2U2 334 aa-2.57□□□□□ -2.82
RNU6-542P-201ENST00000516405 NIPAL2Q9H841 368 aa-2.57□□□□□ -2.82
RNU6-542P-201ENST00000516405 VAT1LQ9HCJ6 419 aa-2.57□□□□□ -2.82
RNU6-542P-201ENST00000516405 SIP14410 1827 aa-2.57□□□□□ -2.82
RNU6-542P-201ENST00000516405 WDR19Q8NEZ3 1342 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 LOC105371045A0A1W2PR82 267 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 A4D1N5 150 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 PGPA6NDG6 321 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 SMIM9A6NGZ8 99 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 SMKR1H3BMG3 65 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 AP3B1O00203 1094 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 UBFD1O14562 309 aaKnown RBP-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 SLC9A3R1O14745 358 aaPredicted RBP-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 PPP1R2P9O14990 202 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 POLR2DO15514 142 aaKnown RBP-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 EEDO75530 441 aaKnown RBP-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 IL1BP01584 269 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 CECR9P0C854 216 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 CXCR1P25024 350 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 DUSP3P51452 185 aaPredicted RBP-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 AKR1C2P52895 323 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 YWHAGP61981 247 aaKnown RBP eCLIP-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 SEMG2Q02383 582 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 AKR1C1Q04828 323 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 ART3Q13508 389 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 PAFAH1B3Q15102 231 aaKnown RBP-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 USH1GQ495M9 461 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 ACTBL2Q562R1 376 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 TMEM215Q68D42 235 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 C12orf54Q6X4T0 127 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 SCGB1D4Q6XE38 83 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 GALNT10Q86SR1 603 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 MARCH3Q86UD3 253 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 YIPF7Q8N8F6 280 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 OR1S2Q8NGQ3 325 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 OR10A6Q8NH74 314 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 OR51E1Q8TCB6 317 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 ZNF396Q96N95 335 aaPredicted RBP-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 EIF5A2Q9GZV4 153 aaKnown RBP-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 REEP1Q9H902 201 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 CDC42SE1Q9NRR8 79 aa-2.58□□□□□ -2.82
RNU6-542P-201ENST00000516405 ITPR1Q14643 2758 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 SBNO1A3KN83 1393 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 JCADQ9P266 1359 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 MAP3K19Q56UN5 1328 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 A0A0U1RQV5 110 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 NDC80O14777 642 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 SLC37A4O43826 429 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 KLF7O75840 302 aaPredicted RBP-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 PGA4P0DJD7 388 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 PGA3P0DJD8 388 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 PGA5P0DJD9 388 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 INCA1Q0VD86 236 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 PJVKQ0ZLH3 352 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 PDK4Q16654 411 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 PET117Q6UWS5 81 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 CBLN2Q8IUK8 224 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 SYCP3Q8IZU3 236 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 KRTCAP2Q8N6L1 136 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 LPCAT1Q8NF37 534 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 RAB3IL1Q8TBN0 382 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 TRMT10AQ8TBZ6 339 aaKnown RBP-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 WFDC5Q8TCV5 224 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 SMCR5Q8TEV8 140 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 TEAD3Q99594 435 aa-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 ROPN1BQ9BZX4 212 aaPredicted RBP-2.59□□□□□ -2.82
RNU6-542P-201ENST00000516405 KIAA0100Q14667 2235 aaKnown RBP-2.6□□□□□ -2.82
RNU6-542P-201ENST00000516405 TANC1Q9C0D5 1861 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 ABCB11O95342 1321 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 NRCAMQ92823 1304 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 MYO5BQ9ULV0 1848 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 IGHV1-18A0A0C4DH31 117 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 ODAMA1E959 279 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 C9J4A7 227 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 DYNC1I1O14576 645 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 ANGPT2O15123 496 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 HSF2BPO75031 334 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 OR2A4O95047 310 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 SHBGP04278 402 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 DEFA4P12838 97 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 ACAA2P42765 397 aaKnown RBP-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 XCL1P47992 114 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 STX1BP61266 288 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 ZNF846Q147U1 533 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 SSX1Q16384 188 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 SHQ1Q6PI26 577 aaKnown RBP-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 LINC00322Q6ZN03 302 aaPredicted RBP-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 MBOAT1Q6ZNC8 495 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 CLEC20AQ6ZU45 233 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 RNF148Q8N7C7 305 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 BCORP1Q8N888 145 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 SPRYD4Q8WW59 207 aaPredicted RBP-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 SLC7A6Q92536 515 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 MUCL1Q96DR8 90 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 OR2A7Q96R45 310 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 C11orf70Q9BRQ4 267 aa-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 TXLNGYQ9BZA5 131 aa-2.6□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms