RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	IL4I1	Q96RQ9	567 aa		12.38	□□□□□ -0.43
LMNA-223	ENST00000515459	GON7	Q9BXV9	100 aa		12.38	□□□□□ -0.43
LMNA-223	ENST00000515459	PPIL3	Q9H2H8	161 aa	Known RBP	12.38	□□□□□ -0.43
LMNA-223	ENST00000515459	RHOF	Q9HBH0	211 aa		12.38	□□□□□ -0.43
LMNA-223	ENST00000515459	KRT84	Q9NSB2	600 aa		12.38	□□□□□ -0.43
LMNA-223	ENST00000515459	WARS2	Q9UGM6	360 aa	Known RBP	12.38	□□□□□ -0.43
LMNA-223	ENST00000515459	LINC01548	A6NM66	108 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	SEC14L6	B5MCN3	397 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	AP4M1	O00189	453 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	DEGS1	O15121	323 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	IGHV3-7	P01780	117 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	CGB3	P0DN86	165 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	CGB7	P0DN87	165 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	ZNF20	P17024	532 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	KIR3DL2	P43630	455 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	CDX1	P47902	265 aa	Predicted RBP	12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	DIAPH2-AS1	Q14236	149 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	CXorf66	Q5JRM2	361 aa	Predicted RBP	12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	LCNL1	Q6ZST4	164 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	FAM220A	Q7Z4H9	259 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459		Q8NFD4	153 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	OR10H4	Q8NGA5	316 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	FGGY	Q96C11	551 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	SCOC	Q9UIL1	159 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	PSG11	Q9UQ72	335 aa		12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	ZNF256	Q9Y2P7	627 aa	Predicted RBP	12.37	□□□□□ -0.43
LMNA-223	ENST00000515459	FKBP6	O75344	327 aa		12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	C21orf33	P30042	268 aa	Predicted RBP	12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	GLP1R	P43220	463 aa		12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	TMEM244	Q5VVB8	128 aa		12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	C12orf73	Q69YU5	71 aa		12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	SAXO1	Q8IYX7	474 aa		12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	OR5D18	Q8NGL1	313 aa		12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	LEAP2	Q969E1	77 aa		12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	THTPA	Q9BU02	230 aa		12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	NEK6	Q9HC98	313 aa		12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	CALY	Q9NYX4	217 aa		12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	IDI2-AS1	Q9NZ38	188 aa		12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	SIRT4	Q9Y6E7	314 aa	Predicted RBP	12.36	□□□□□ -0.43
LMNA-223	ENST00000515459	MEIKIN	A0A087WXM9	373 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	ZAR1L	A6NP61	321 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	APOL3	O95236	402 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	EPHA2	P29317	976 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	GPR12	P47775	334 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	GNG10	P50151	68 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	FOXE3	Q13461	319 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	GPR50	Q13585	617 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	EBI3	Q14213	229 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	CDK5R1	Q15078	307 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	SPATA24	Q86W54	205 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	TGIF2LX	Q8IUE1	241 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	RNF152	Q8N8N0	203 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	OR51T1	Q8NGJ9	327 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	OR13A1	Q8NGR1	328 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	SPACA5	Q96QH8	159 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	OSBPL10	Q9BXB5	764 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	ABCG5	Q9H222	651 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	LIN7C	Q9NUP9	197 aa	Known RBP	12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	KIF25	Q9UIL4	384 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	GNG8	Q9UK08	70 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	SMAD5-AS1	Q9Y6J3	95 aa		12.35	□□□□□ -0.43
LMNA-223	ENST00000515459	NCBP2L	A6PVI3	153 aa	Known RBP	12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	CCRL2	O00421	344 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	HSPB6	O14558	160 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	MITF	O75030	526 aa	Predicted RBP	12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	IL1A	P01583	271 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	ISG15	P05161	165 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	ELANE	P08246	267 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	T-ENOL	P0DO92	83 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	HTR1F	P30939	366 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	ATP6V1E1	P36543	226 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	ISL1	P61371	349 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	GNGT1	P63211	74 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	FLOT2	Q14254	428 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	ZNF260	Q3ZCT1	412 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	TP53I3	Q53FA7	332 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	OR10X1	Q8NGY0	326 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	EAF1	Q96JC9	268 aa	Predicted RBP	12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	RCHY1	Q96PM5	261 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	MBOAT4	Q96T53	435 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	BARHL1	Q9BZE3	327 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	NCOR1P1	Q9H4R4	102 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	LINC00574	Q9H8X3	128 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	TENM2	Q9NT68	2774 aa		12.34	□□□□□ -0.43
LMNA-223	ENST00000515459	NPIPB11	E5RHQ5	1161 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459		H0YJX3	145 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	HSD17B6	O14756	317 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	RRP9	O43818	475 aa	Known RBP	12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	MPZL2	O60487	215 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	MT-ND2	P03891	347 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	ZNF816	Q0VGE8	651 aa	Predicted RBP	12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	LTC4S	Q16873	150 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	PAN3	Q58A45	887 aa	Known RBP	12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	SLC16A12	Q6ZSM3	486 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	MOB3B	Q86TA1	216 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	OR13C9	Q8NGT0	318 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	OR2G2	Q8NGZ5	317 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	RFESD	Q8TAC1	157 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	C4orf3	Q8WVX3	66 aa		12.33	□□□□□ -0.44
LMNA-223	ENST00000515459	RNF166	Q96A37	237 aa	Predicted RBP	12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms