RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-222	ENST00000514654	NPIPB9	F8W1W9	429 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	KLF4	O43474	513 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	TOX4	O94842	621 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	OR2C1	O95371	312 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CLEC3B	P05452	202 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CTSD	P07339	412 aa	Predicted RBP	5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	TMEM33	P57088	247 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	HABP2	Q14520	560 aa	Predicted RBP	5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	ACOT6	Q3I5F7	207 aa	Predicted RBP	5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CD200R1L	Q6Q8B3	271 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	S100A7A	Q86SG5	101 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	OR2C3	Q8N628	320 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	OR5A2	Q8NGI9	324 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	MED30	Q96HR3	178 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	SIGLEC12	Q96PQ1	595 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	LRFN3	Q9BTN0	628 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	NMES1	Q9C002	83 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	SLC2A9	Q9NRM0	540 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	ZNF236	Q9UL36	1845 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654		A0A0G2JMM0	328 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654		A0A1W2PPB8	328 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654		A0A1W2PRS3	328 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	KIR3DP1	A8MWS1	328 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	FAM157A	C9JC47	383 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CST4	P01036	141 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	THBS3	P49746	956 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CFHR1	Q03591	330 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	TMEM41B	Q5BJD5	291 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	C15orf54	Q8N8G6	183 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	SMIM7	Q9BQ49	75 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	RTN4R	Q9BZR6	473 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	SAP30L	Q9HAJ7	183 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	OPN4	Q9UHM6	478 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	VSIG4	Q9Y279	399 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	PCNX1	Q96RV3	2341 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	C16orf97	H3BN30	126 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CYC1	P08574	325 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	FLI1	Q01543	452 aa	Predicted RBP	5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	C4orf17	Q53FE4	359 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	TMEM255A	Q5JRV8	349 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	PRSS54	Q6PEW0	395 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	INO80C	Q6PI98	192 aa	Predicted RBP	5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	TIPARP	Q7Z3E1	657 aa	Known RBP	5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	RPE	Q96AT9	228 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	C10orf35	Q96D05	121 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	POM121L2	Q96KW2	1035 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	GPHA2	Q96T91	129 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	LPAR5	Q9H1C0	372 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	DIDO1	Q9BTC0	2240 aa	Known RBP	5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	PI4KA	P42356	2102 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	TRPM7	Q96QT4	1865 aa		5.37	□□□□□ -1.55
ATP2C1-222	ENST00000514654	hADV38S2	A0JD32	116 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CCL21	O00585	134 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	IGF2	P01344	180 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CRH	P06850	196 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	VSIG10L2	P0DP72	767 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	KCNJ3	P48549	501 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	UBE2G1	P62253	170 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	MRPS11	P82912	194 aa	Known RBP	5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	SLC38A11	Q08AI6	406 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	KIAA0141	Q14154	515 aa	Predicted RBP	5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CLLU1	Q5K131	121 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	SLC25A42	Q86VD7	318 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	FDCSP	Q8NFU4	85 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	IL36G	Q9NZH8	169 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	AMDHD2	Q9Y303	409 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654		A0A0G2JMZ2	1700 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	LRRC37A2	A6NM11	1700 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	RNASEK-C17orf49	H0YIS7	233 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	SYNGR1	O43759	233 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CHST1	O43916	411 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	IFI6	P09912	130 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	RAB4A	P20338	218 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	MDH2	P40926	338 aa	Known RBP	5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	LGALSL	Q3ZCW2	172 aa	Predicted RBP	5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	ZNF658B	Q4V348	819 aa	Predicted RBP	5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	IGSF11	Q5DX21	431 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	TMEM211	Q6ICI0	200 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	ADAMTS17	Q8TE56	1095 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	CHAC2	Q8WUX2	184 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	SCMH1	Q96GD3	660 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	TUBG2	Q9NRH3	451 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	UQCC1	Q9NVA1	299 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	FAM206A	Q9NX38	181 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	SBF1	O95248	1867 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654		A0A0U1RQV5	110 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	NKX2-6	A6NCS4	301 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	ATP6V1G2-DDX39B	F2Z307	99 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	HRAS	P01112	189 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	KLK2	P20151	261 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	PPP1CC	P36873	323 aa	Known RBP	5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	SUCLG1	P53597	346 aa	Known RBP	5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	UCP2	P55851	309 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	MPPED2	Q15777	294 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	ARTN	Q5T4W7	220 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	DCAF12L2	Q5VW00	463 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	PRR27	Q6MZM9	219 aa		5.36	□□□□□ -1.55
ATP2C1-222	ENST00000514654	ETV3L	Q6ZN32	361 aa		5.36	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms