RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 GALEQ14376 348 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 ODF4Q2M2E3 257 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 PVRIGQ6DKI7 326 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 Q6ZR54 194 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 MSANTD1Q6ZTZ1 278 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 VTCN1Q7Z7D3 282 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 ZNF573Q86YE8 665 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 UBE2DNLQ8IWF7 75 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 RDH10Q8IZV5 341 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 CNPY4Q8N129 248 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 MINDY2Q8NBR6 621 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 OR52B4Q8NGK2 314 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 TSPEARQ8WU66 669 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 RASSF5Q8WWW0 418 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 EMG1Q92979 244 aaKnown RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 SLAMF9Q96A28 289 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 SPDL1Q96EA4 605 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 FNDC11Q9BVV2 318 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 ANKRD60Q9BZ19 345 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 BARHL1Q9BZE3 327 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 VIPAS39Q9H9C1 493 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 CNOT2Q9NZN8 540 aaKnown RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 FOXA2Q9Y261 457 aaPredicted RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 V9GYY5 206 aaPredicted RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 LRP1Q07954 4544 aaKnown RBP2.39□□□□□ -2.03
CHD1-211ENST00000514344 A0A087X0M5 115 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 A0A1B0GX30 115 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 MGST3O14880 152 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 NOS1APO75052 506 aaPredicted RBP2.39□□□□□ -2.03
CHD1-211ENST00000514344 ZNF682O95780 498 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 NRASP01111 189 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 TRGV3P03979 118 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 GAPDHP04406 335 aaKnown RBP2.39□□□□□ -2.03
CHD1-211ENST00000514344 RPL35AP18077 110 aaKnown RBP2.39□□□□□ -2.03
CHD1-211ENST00000514344 IFNA8P32881 189 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 GLP1RP43220 463 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 OR3A1P47881 315 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 APOC4P55056 127 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 ERVK11-1P61568 191 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 SCN1BQ07699 218 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 ATXN7L3Q14CW9 347 aaPredicted RBP2.39□□□□□ -2.03
CHD1-211ENST00000514344 C17orf58Q2M2W7 97 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 RPEL1Q2QD12 228 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 TM4SF20Q53R12 229 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 ACTBL2Q562R1 376 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 DPY19L2P2Q6ZN68 376 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 Q6ZTC4 211 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 FKBP9P1Q75LS8 142 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 LAX1Q8IWV1 398 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 TCEANCQ8N8B7 351 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 TMEM104Q8NE00 496 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 DNAAF1Q8NEP3 725 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 OR8B12Q8NGG6 310 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 PRRC1Q96M27 445 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 SPACA5Q96QH8 159 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 MBOAT4Q96T53 435 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 AMELYQ99218 206 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 RARRES2Q99969 163 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 SCRT1Q9BWW7 348 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 CADM1Q9BY67 442 aaKnown RBP2.39□□□□□ -2.03
CHD1-211ENST00000514344 RGCCQ9H4X1 137 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 MTCH1Q9NZJ7 389 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 BAG5Q9UL15 447 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 CORO2BQ9UQ03 480 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 TRBV5-3A0A0A0MS03 114 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 FAM230AA0A1W2PPH8 454 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 ODAMA1E959 279 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 LGALS9O00182 355 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 FFAR1O14842 300 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 CD40LGP29965 261 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 FUSP35637 526 aaKnown RBP eCLIP2.39□□□□□ -2.03
CHD1-211ENST00000514344 KRTAP10-2P60368 255 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 TRAM2Q15035 370 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 TATDN3Q17R31 274 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 KRTAP19-4Q3LI73 84 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 ZNF684Q5T5D7 378 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 SLX4IPQ5VYV7 408 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 MBOAT2Q6ZWT7 520 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 IFT20Q8IY31 132 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 IZUMO1Q8IYV9 350 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 STPG3Q8N7X2 389 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 FAM156AQ8NDB6 213 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 RSRC1Q96IZ7 334 aaKnown RBP2.39□□□□□ -2.03
CHD1-211ENST00000514344 CEP19Q96LK0 163 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 GPX7Q96SL4 187 aaPredicted RBP2.39□□□□□ -2.03
CHD1-211ENST00000514344 EBF4Q9BQW3 602 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 CHRDL1Q9BU40 450 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 IFT27Q9BW83 186 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 RBFOX1Q9NWB1 397 aaKnown RBP2.39□□□□□ -2.03
CHD1-211ENST00000514344 TAS2R3Q9NYW6 316 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 UBQLN2Q9UHD9 624 aa2.39□□□□□ -2.03
CHD1-211ENST00000514344 CXCR6O00574 342 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 TXNDC12O95881 172 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 IFNA21P01568 189 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 IFNA17P01571 189 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 H2BFMP0C1H6 154 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 CLUP10909 449 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 HAMPP81172 84 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 PPP1R8Q12972 351 aaKnown RBP2.38□□□□□ -2.03
CHD1-211ENST00000514344 DEFB114Q30KQ6 69 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms