RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 IL36RNQ9UBH0 155 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 LPAR3Q9UBY5 353 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 MAB21L2Q9Y586 359 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 TRAV18A0A075B6X5 111 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 LOC105371242A0A075B767 164 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 TRBV23-1A0A0A0MS06 115 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 IGHV4-61A0A0C4DH41 118 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 POM121CA8CG34 1229 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 SERPINE3A8MV23 424 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 INAFM1C9JVW0 142 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 RNF223E7ERA6 249 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 CTDSP2O14595 271 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 SOCS1O15524 211 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 CSN2P05814 226 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 LIPFP07098 398 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 GSTP1P09211 210 aaKnown RBP8.44□□□□□ -1.06
NEDD9-214ENST00000513989 ERP29P30040 261 aaKnown RBP8.44□□□□□ -1.06
NEDD9-214ENST00000513989 RBMXP38159 391 aaKnown RBP8.44□□□□□ -1.06
NEDD9-214ENST00000513989 CEBPDP49716 269 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-214ENST00000513989 LMO4P61968 165 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 PITPNAQ00169 270 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 KRBOX4Q5JUW0 171 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 WDR25Q64LD2 544 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-214ENST00000513989 BAIAP2L2Q6UXY1 529 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 C17orf107Q6ZR85 190 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 OR8H2Q8N162 312 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 BPIFB2Q8N4F0 458 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 FAM216BQ8N7L0 139 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 DIRAS2Q96HU8 199 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 NICN1Q9BSH3 213 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 FAAP24Q9BTP7 215 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 SHARPINQ9H0F6 387 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 KCNK15Q9H427 330 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 RAB9BQ9NP90 201 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 ETAA1Q9NY74 926 aa8.44□□□□□ -1.06
NEDD9-214ENST00000513989 RCC2Q9P258 522 aaKnown RBP8.44□□□□□ -1.06
NEDD9-214ENST00000513989 MRPS7Q9Y2R9 242 aaKnown RBP8.44□□□□□ -1.06
NEDD9-214ENST00000513989 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.44□□□□□ -1.063e-14■■□□□ 12.9
NEDD9-214ENST00000513989 hCG_1809904A0A1W2PP81 198 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 A0A1W2PPE2 198 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 A0A1W2PR64 198 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 A0A1W2PRV1 198 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 hADV38S2A0JD32 116 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 TMEM82A0PJX8 343 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 TMEM30CPA0ZSE6 113 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 FABP12A6NFH5 140 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 B4DSR2 109 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 F5H0A9 414 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-214ENST00000513989 RAB27BO00194 218 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 HSPB6O14558 160 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 PSPNO60542 156 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 ZNF737O75373 536 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 CD3GP09693 182 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 HIST1H1DP16402 221 aaKnown RBP8.43□□□□□ -1.06
NEDD9-214ENST00000513989 ELK1P19419 428 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 AMY2BP19961 511 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 GZMHP20718 246 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 CDK2P24941 298 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 CHATP28329 748 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 OR3A1P47881 315 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 GZMKP49863 264 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 TMEM50BP56557 158 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 EDDM3BP56851 147 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 RPL31P62899 125 aaKnown RBP8.43□□□□□ -1.06
NEDD9-214ENST00000513989 MEF2CQ06413 473 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-214ENST00000513989 PLA2G7Q13093 441 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 ARFRP1Q13795 201 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 EDDM3AQ14507 147 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 PNLIPRP3Q17RR3 467 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 SPANXN2Q5MJ10 180 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 SLC35E4Q6ICL7 350 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 BRICD5Q6PL45 260 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 BTNL3Q6UXE8 466 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 LINC00299Q6ZSB3 139 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 BTN2A1Q7KYR7 527 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 C6orf201Q7Z4U5 140 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 LINC01356Q8N9X3 169 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 H1FXQ92522 213 aaKnown RBP8.43□□□□□ -1.06
NEDD9-214ENST00000513989 SLC25A38Q96DW6 304 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 ARHGAP5-AS1Q96IT6 56 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 DMRTB1Q96MA1 342 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 PECRQ9BY49 303 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 CHST6Q9GZX3 395 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 PPA2Q9H2U2 334 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 NCOR1P1Q9H4R4 102 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 CHMP1AQ9HD42 196 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-214ENST00000513989 PTTG2Q9NZH5 202 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 OR6C3Q9NZP0 311 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 EXTL2Q9UBQ6 330 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 MGAT4AQ9UM21 535 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 NBEAL1Q6ZS30 2694 aa8.43□□□□□ -1.06
NEDD9-214ENST00000513989 TRGV10A0A0A0MS01 117 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 A0A0A6YYD4 124 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 A0A1W2PQ09 198 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 UBE2QL1A1L167 161 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 EIF4EP06730 217 aaKnown RBP8.42□□□□□ -1.06
NEDD9-214ENST00000513989 GNB3P16520 340 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 TNFSF8P32971 234 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 P2RX3P56373 397 aa8.42□□□□□ -1.06
NEDD9-214ENST00000513989 GNG2P59768 71 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms