RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SERPINF1P36955 418 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 MZT1Q08AG7 82 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 OPCMLQ14982 345 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 TMEM65Q6PI78 240 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 GSG1LQ6UXU4 331 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 SGPP2Q8IWX5 399 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 SLC38A6Q8IZM9 456 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 SLC7A5P1Q8MH63 180 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 PPP1R1CQ8WVI7 109 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 SEC22AQ96IW7 307 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 NMES1Q9C002 83 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 MSL2Q9HCI7 577 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 COMMD9Q9P000 198 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 TLN1Q9Y490 2541 aaKnown RBP12.65□□□□□ -0.38
VCAN-211ENST00000513984 IGF2RP11717 2491 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 PCNX1Q96RV3 2341 aa12.65□□□□□ -0.38
VCAN-211ENST00000513984 IGHV3-64DA0A0J9YX35 117 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 FAM25EA8MYX2 175 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 PPYP01298 95 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 IGHV3-13P01766 116 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 SCTP09683 121 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 CTXN2P0C2S0 81 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 PIGPP57054 158 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 FXYD4P59646 89 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 HERV-K104P61576 105 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 RBPJQ06330 500 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 HERPUD1Q15011 391 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 PAN3Q58A45 887 aaKnown RBP12.65□□□□□ -0.39
VCAN-211ENST00000513984 FIP1L1Q6UN15 594 aaKnown RBP12.65□□□□□ -0.39
VCAN-211ENST00000513984 C20orf204Q6ZNR8 217 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 GAPTQ8N292 157 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 RELL2Q8NC24 303 aaPredicted RBP12.65□□□□□ -0.39
VCAN-211ENST00000513984 OR8H1Q8NGG4 311 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 TMEM165Q9HC07 324 aa12.65□□□□□ -0.39
VCAN-211ENST00000513984 C5orf51A6NDU8 294 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 H7C1Q1 480 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 SH2D1BO14796 132 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 TK1P04183 234 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 S100A11P31949 105 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 RBMXP38159 391 aaKnown RBP12.64□□□□□ -0.39
VCAN-211ENST00000513984 CYCSP99999 105 aaKnown RBP12.64□□□□□ -0.39
VCAN-211ENST00000513984 PRAMEF6Q5VXH4 476 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 ALKBH2Q6NS38 261 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 C11orf87Q6NUJ2 197 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 WDR82Q6UXN9 313 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 C22orf34Q6ZV56 151 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 MOB1BQ7L9L4 216 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 ZNF680Q8NEM1 530 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 GALNT14Q96FL9 552 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 RSRP1Q9BUV0 290 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 C1orf123Q9NWV4 160 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 PRR13Q9NZ81 148 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 PLCE1Q9P212 2302 aa12.64□□□□□ -0.39
VCAN-211ENST00000513984 IGLV3-9A0A075B6K5 115 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 TEX13DA0A0J9YY54 714 aaPredicted RBP12.63□□□□□ -0.39
VCAN-211ENST00000513984 SIRPB1O00241 398 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 ADAP1O75689 374 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 TUSC2O75896 110 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 PTBP3O95758 552 aaKnown RBP12.63□□□□□ -0.39
VCAN-211ENST00000513984 CD200P41217 278 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 RPS23P62266 143 aaKnown RBP12.63□□□□□ -0.39
VCAN-211ENST00000513984 HLA-DRB3P79483 266 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 ABCA11PQ4W5N1 156 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 ZNF497Q6ZNH5 498 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 ZNF826PQ6ZT77 177 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 TMUB2Q71RG4 321 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 LRP11Q86VZ4 500 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 OR5T2Q8NGG2 359 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 OR4A4PQ8NGN8 299 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 LILRB4Q8NHJ6 448 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 TMEM171Q8WVE6 324 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 NAA60Q9H7X0 242 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 SLC2A9Q9NRM0 540 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 RASL12Q9NYN1 266 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 SH3BGRL2Q9UJC5 107 aa12.63□□□□□ -0.39
VCAN-211ENST00000513984 IGKV1-6A0A0C4DH72 117 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 A6NLC8 198 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 ATP6V1G2-DDX39BF2Z307 99 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 C16orf97H3BN30 126 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 DIRAS3O95661 229 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 HAND1O96004 215 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 LMO1P25800 156 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 KLF3P57682 345 aaPredicted RBP12.62□□□□□ -0.39
VCAN-211ENST00000513984 ACP7Q6ZNF0 438 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 ZNF546Q86UE3 836 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 PLPPR1Q8TBJ4 325 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 RTN4IP1Q8WWV3 396 aaPredicted RBP12.62□□□□□ -0.39
VCAN-211ENST00000513984 CABLES2Q9BTV7 478 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 MFFQ9GZY8 342 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 PCDHB10Q9UN67 800 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 KIAA2026Q5HYC2 2103 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 C13orf42A0A1B0GVH6 325 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 BET1O15155 118 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 CD40P25942 277 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 HTR2BP41595 481 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 KCNJ3P48549 501 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 LRRC37A5PQ49AS3 106 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 PCSK4Q6UW60 755 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 SSX8Q7RTT4 187 aa12.62□□□□□ -0.39
VCAN-211ENST00000513984 C5orf24Q7Z6I8 188 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms