RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678		H0YJX3	145 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	LALBA	P00709	142 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	CGB3	P0DN86	165 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	CGB7	P0DN87	165 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	JUNB	P17275	347 aa	Predicted RBP	13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	PTGFR	P43088	359 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	PPP3R1	P63098	170 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	HABP2	Q14520	560 aa	Predicted RBP	13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	KRBOX4	Q5JUW0	171 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	TMEM219	Q86XT9	240 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	C1QL4	Q86Z23	238 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	ABHD12	Q8N2K0	398 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	GGH	Q92820	318 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	CREB3L1	Q96BA8	519 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	GPER1	Q99527	375 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	WNT10A	Q9GZT5	417 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	PLCXD1	Q9NUJ7	323 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	CHCHD3	Q9NX63	227 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	DPM3	Q9P2X0	92 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	CLEC2D	Q9UHP7	191 aa		13.51	□□□□□ -0.25
MATR3-222	ENST00000513678	DNAH3	Q8TD57	4116 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	TRAV24	A0A0B4J272	114 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	VSIG10L2	P0DP72	767 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	IGFBP3	P17936	291 aa	Predicted RBP	13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	CAPG	P40121	348 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	TAS2R43	P59537	309 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	SCN1B	Q07699	218 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	ST3GAL4	Q11206	333 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	YIF1B	Q5BJH7	314 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	KPRP	Q5T749	579 aa	Predicted RBP	13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	PRAMEF5	Q5TYX0	476 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	NDNF	Q8TB73	568 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	GHSR	Q92847	366 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	PGLYRP3	Q96LB9	341 aa		13.5	□□□□□ -0.25
MATR3-222	ENST00000513678	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	F2RL2	O00254	374 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	CD1A	P06126	327 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	FST	P19883	344 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	BDKRB2	P30411	391 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	RPS11	P62280	158 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	ATXN7L3	Q14CW9	347 aa	Predicted RBP	13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	RSU1	Q15404	277 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	C17orf58	Q2M2W7	97 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	BEAN1	Q3B7T3	259 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678		Q499Y3	187 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	PAN3	Q58A45	887 aa	Known RBP	13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	SAMD5	Q5TGI4	173 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	LAIR2	Q6ISS4	152 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	C16orf82	Q7Z2V1	217 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	LINC00596	Q86U02	117 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	ZNF565	Q8N9K5	539 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	OR4D6	Q8NGJ1	314 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	BARHL1	Q9BZE3	327 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	PPIL3	Q9H2H8	161 aa	Known RBP	13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	PSORS1C1	Q9UIG5	152 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	HILPDA	Q9Y5L2	63 aa		13.49	□□□□□ -0.25
MATR3-222	ENST00000513678	PLXNB1	O43157	2135 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	LEUTX	A8MZ59	168 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	OOSP1	A8MZH6	123 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678		H3BUI4	141 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	ZNF780A	O75290	641 aa	Predicted RBP	13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	FBXO24	O75426	580 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	ZNF93	P35789	620 aa	Predicted RBP	13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	GDNF	P39905	211 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	OR3A4P	P47883	348 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	SLC34A1	Q06495	639 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	RIPK1	Q13546	671 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	HLA-DRB5	Q30154	266 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	DDI2	Q5TDH0	399 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	RSBN1	Q5VWQ0	802 aa	Predicted RBP	13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	BAIAP2L2	Q6UXY1	529 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678		Q6ZS46	218 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	SATL1	Q86VE3	508 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	CDH26	Q8IXH8	852 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	OR10A7	Q8NGE5	316 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	PRSS22	Q9GZN4	317 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	METTL9	Q9H1A3	318 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	ZNF286A	Q9HBT8	521 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	PCDHB16	Q9NRJ7	776 aa		13.48	□□□□□ -0.25
MATR3-222	ENST00000513678	TRBV5-7	A0A0A0MS05	114 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	ADARB2-AS1	A8MUL3	147 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	NPIPB11	E5RHQ5	1161 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678		G3V4G9	280 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	LY6L	H3BQJ8	138 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	GNAO1	P09471	354 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	CD28	P10747	220 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	C21orf33	P30042	268 aa	Predicted RBP	13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	BRS3	P32247	399 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	CEACAM3	P40198	252 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	ARHGDIB	P52566	201 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	RBM11	P57052	281 aa	Known RBP	13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	BLCAP	P62952	87 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	PIGY	Q3MUY2	71 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	SLC16A12	Q6ZSM3	486 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	OSR2	Q8N2R0	312 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	KIRREL1	Q96J84	757 aa		13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	NR1H4	Q96RI1	486 aa	Predicted RBP	13.47	□□□□□ -0.25
MATR3-222	ENST00000513678	FAM192A	Q9GZU8	254 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms