RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ACAA2P42765 397 aaKnown RBP9.91□□□□□ -0.82
TCOF1-211ENST00000513346 ERGIC1Q969X5 290 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 FAM117AQ9C073 453 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 A0A1W2PPV9 198 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 KIAA1324LA8MWY0 1029 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-211ENST00000513346 DEGS1O15121 323 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 FOLR2P14207 255 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 CDAP32320 146 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 OR3A1P47881 315 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 ERVFC1-1P60608 527 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 PSG6Q00889 435 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 SLC25A26Q70HW3 274 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 C11orf42Q8N5U0 333 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 OR10AD1Q8NGE0 317 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 ANGPTL4Q9BY76 406 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 WDR13Q9H1Z4 485 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 NAGKQ9UJ70 344 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 ICE1Q9Y2F5 2266 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 ALPK2Q86TB3 2170 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 KLF4O43474 513 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 HIST1H1BP16401 226 aaKnown RBP9.91□□□□□ -0.82
TCOF1-211ENST00000513346 ZNF17P17021 662 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 P2RY4P51582 365 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 CNN1P51911 297 aaKnown RBP9.91□□□□□ -0.82
TCOF1-211ENST00000513346 FOXF1Q12946 379 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 SCGB2A2Q13296 93 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 ACY3Q96HD9 319 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 SMIM8Q96KF7 97 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 MSL2Q9HCI7 577 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 B3GAT1Q9P2W7 334 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 TIMM10BQ9Y5J6 103 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 FGF16O43320 207 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 HRASP01112 189 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 KRASP01116 189 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 SUMO3P55854 103 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-211ENST00000513346 SLC38A11Q08AI6 406 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 FFAR4Q5NUL3 377 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 ZNF468Q5VIY5 522 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-211ENST00000513346 APCDD1LQ8NCL9 501 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 OR5B3Q8NH48 314 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 SLC25A28Q96A46 364 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 DUSP15Q9H1R2 295 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-211ENST00000513346 HDGFL3Q9Y3E1 203 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 DICER1Q9UPY3 1922 aaKnown RBP9.9□□□□□ -0.82
TCOF1-211ENST00000513346 LNP1A1A4G5 178 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 TMEM229AB2RXF0 380 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 CHST1O43916 411 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 AARDQ4LEZ3 155 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 H1FOOQ8IZA3 346 aaPredicted RBP9.9□□□□□ -0.82
TCOF1-211ENST00000513346 NOXO1Q8NFA2 376 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 RDH5Q92781 318 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 STARD4Q96DR4 205 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 TRIB1Q96RU8 372 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 FSCN3Q9NQT6 498 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 CBLN4Q9NTU7 201 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 P4HTMQ9NXG6 502 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 PLXNA1Q9UIW2 1896 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 KLK10O43240 276 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 DHRS3O75911 302 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 GRPP07492 148 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 PPP1CCP36873 323 aaKnown RBP9.9□□□□□ -0.82
TCOF1-211ENST00000513346 ANKRD55Q3KP44 614 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 C1orf100Q5SVJ3 147 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 ETV3LQ6ZN32 361 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 AQP3Q92482 292 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 SLC25A22Q9H936 323 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 FAM60AQ9NP50 221 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 SLC2A9Q9NRM0 540 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 ZDHHC8Q9ULC8 765 aa9.9□□□□□ -0.82
TCOF1-211ENST00000513346 PMS2P1A4D2B8 440 aa9.9□□□□□ -0.83
TCOF1-211ENST00000513346 COLCA2A8K830 154 aa9.9□□□□□ -0.83
TCOF1-211ENST00000513346 PLPP3O14495 311 aa9.9□□□□□ -0.83
TCOF1-211ENST00000513346 VDAC1P21796 283 aa9.9□□□□□ -0.83
TCOF1-211ENST00000513346 GLIPR1P48060 266 aa9.9□□□□□ -0.83
TCOF1-211ENST00000513346 MNX1P50219 401 aaPredicted RBP9.9□□□□□ -0.83
TCOF1-211ENST00000513346 FUT6P51993 359 aa9.9□□□□□ -0.83
TCOF1-211ENST00000513346 ZNF154Q13106 437 aa9.9□□□□□ -0.83
TCOF1-211ENST00000513346 C20orf196Q8IYI0 205 aa9.9□□□□□ -0.83
TCOF1-211ENST00000513346 FAM122AQ96E09 287 aa9.9□□□□□ -0.83
TCOF1-211ENST00000513346 EML2O95834 649 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 BCL2P10415 239 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 GAS1P54826 345 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 SRSF3P84103 164 aaKnown RBP9.89□□□□□ -0.83
TCOF1-211ENST00000513346 C16orf82Q7Z2V1 217 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 CARFQ8N187 725 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 VN1R17PQ8TDU5 208 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 MANBALQ9NQG1 85 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 DECR2Q9NUI1 292 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 PIKFYVEQ9Y2I7 2098 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 IGHV3-15A0A0B4J1V0 119 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 RER1O15258 196 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 PITX3O75364 302 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 NDUFS6O75380 124 aaKnown RBP9.89□□□□□ -0.83
TCOF1-211ENST00000513346 EDDM3BP56851 147 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 RND3P61587 244 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 OR10G4Q8NGN3 311 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 OR10G9Q8NGN4 311 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 OR10G7Q8NGN6 311 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 OR13G1Q8NGZ3 307 aa9.89□□□□□ -0.83
TCOF1-211ENST00000513346 RARRES2Q99969 163 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms