RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 APOL3O95236 402 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 DUS4LO95620 317 aaKnown RBP5.74□□□□□ -1.49
USP46-208ENST00000512656 ISG15P05161 165 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 HTR1AP08908 422 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 ATF1P18846 271 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 BCL3P20749 454 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 CDK2P24941 298 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 DUSP1P28562 367 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 MNDAP41218 407 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 PTGFRP43088 359 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 OR3A1P47881 315 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 NPBWR2P48146 333 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 CCR9P51686 369 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 SNU13P55769 128 aaKnown RBP5.74□□□□□ -1.49
USP46-208ENST00000512656 SLC35A2P78381 396 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 PDZK1IP1Q13113 114 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 TP53I3Q53FA7 332 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 LDLRAD2Q5SZI1 272 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 C1orf146Q5VVC0 180 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 SAXO1Q8IYX7 474 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 Q8N1X5 172 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 PRSS35Q8N3Z0 413 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 TPRX1Q8N7U7 411 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 STPG3Q8N7X2 389 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 CHST4Q8NCG5 386 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 OR4X2Q8NGF9 303 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 OR52N4Q8NGI2 321 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 OR4D6Q8NGJ1 314 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 OR4P4Q8NGL7 312 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 OR2G2Q8NGZ5 317 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 BCAS4Q8TDM0 211 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 TRUB1Q8WWH5 349 aaKnown RBP5.74□□□□□ -1.49
USP46-208ENST00000512656 CORO2AQ92828 525 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 FGGYQ96C11 551 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 ADAT3Q96EY9 351 aaPredicted RBP5.74□□□□□ -1.49
USP46-208ENST00000512656 CENPNQ96H22 339 aaPredicted RBP5.74□□□□□ -1.49
USP46-208ENST00000512656 OPALINQ96PE5 141 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 SLC25A33Q9BSK2 321 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 GABARAPL3Q9BY60 117 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 COMMD4Q9H0A8 199 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 RIBC2Q9H4K1 309 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 PCDHB16Q9NRJ7 776 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 AURKAIP1Q9NWT8 199 aaPredicted RBP5.74□□□□□ -1.49
USP46-208ENST00000512656 OR6C3Q9NZP0 311 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 IL36RNQ9UBH0 155 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 HHLA2Q9UM44 414 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 GSTK1Q9Y2Q3 226 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 ORC6Q9Y5N6 252 aa5.74□□□□□ -1.49
USP46-208ENST00000512656 IGKV1-9A0A0C4DH69 117 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 DAPL1A0PJW8 107 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 ODAMA1E959 279 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 ATP5HO75947 161 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 KDM4BO94953 1096 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 OR2H2O95918 312 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 MT-ND2P03891 347 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 CSN2P05814 226 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 FAM106CPP0CH98 169 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 DBTP11182 482 aaKnown RBP5.73□□□□□ -1.49
USP46-208ENST00000512656 ZNF44P15621 663 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 IGLL1P15814 213 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 NAT1P18440 290 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 LMO1P25800 156 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 CD34P28906 385 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 KIR3DL2P43630 455 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 ISL1P61371 349 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 SCN1BQ07699 218 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 TMEM95Q3KNT9 176 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 ABCA11PQ4W5N1 156 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 KRBOX4Q5JUW0 171 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 PRAMEF5Q5TYX0 476 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 MEDAGQ5VYS4 303 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 FOXB2Q5VYV0 432 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 CCDC121Q6ZUS5 278 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 AMIGO2Q86SJ2 522 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 RDH10Q8IZV5 341 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 OR13C3Q8NGS6 347 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 DPF1Q92782 380 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 EME1Q96AY2 570 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 CPNE2Q96FN4 548 aaPredicted RBP5.73□□□□□ -1.49
USP46-208ENST00000512656 RBM14Q96PK6 669 aaKnown RBP5.73□□□□□ -1.49
USP46-208ENST00000512656 MBOAT4Q96T53 435 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 KRTAP17-1Q9BYP8 105 aa5.73□□□□□ -1.49
USP46-208ENST00000512656 AMMECR1Q9Y4X0 333 aaPredicted RBP5.73□□□□□ -1.49
USP46-208ENST00000512656 ZNF729A6NN14 1252 aaPredicted RBP5.72□□□□□ -1.49
USP46-208ENST00000512656 BUB1B-PAK6H3BSN5 160 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 DEGS1O15121 323 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 SLC16A6O15403 523 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 CIB2O75838 187 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 MMP23AO75900 390 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 MPIG6BO95866 241 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 IGLV1-47P01700 117 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 LPLP06858 475 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 TMEM225BP0DP42 221 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 CALCBP10092 127 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 C21orf33P30042 268 aaPredicted RBP5.72□□□□□ -1.49
USP46-208ENST00000512656 POLR2IP36954 125 aaKnown RBP5.72□□□□□ -1.49
USP46-208ENST00000512656 OR3A4PP47883 348 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 GLIPR1P48060 266 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 ZNF85Q03923 595 aa5.72□□□□□ -1.49
USP46-208ENST00000512656 AESQ08117 197 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms