RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 RHEBQ15382 184 aa7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 TMEM42Q69YG0 159 aa7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 ASCL4Q6XD76 172 aa7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 TK1P04183 234 aa7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 EDN3P14138 238 aa7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 EIF2S3P41091 472 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 UCP3P55916 312 aa7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 ZNF154Q13106 437 aa7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 DUSP23Q9BVJ7 150 aa7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 BCL2L14Q9BZR8 327 aa7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 PLEKHF2Q9H8W4 249 aa7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 SEBOXQ9HB31 216 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-215ENST00000512632 ZNF816-ZNF321PA0A0X1KG74 233 aa7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 HSPA12AO43301 675 aa7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 BCL3P20749 454 aa7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 HAAOP46952 286 aa7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 DAZAP2Q15038 168 aaPredicted RBP7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 HLA-BQ31612 363 aa7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 TMEM211Q6ICI0 200 aa7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 FAM180AQ6UWF9 173 aa7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 CYB561D1Q8N8Q1 229 aa7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 CPEB3Q8NE35 698 aaKnown RBP7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 OR56B2PQ8NGI1 322 aa7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 OR10D3Q8NH80 312 aa7.96□□□□□ -1.13
LIMCH1-215ENST00000512632 ZNF716A6NP11 495 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 C9J4A7 227 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 CDS2O95674 445 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 IFNA17P01571 189 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 ZNF100Q8IYN0 542 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 SELENOHQ8IZQ5 122 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 LFNGQ8NES3 379 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 CPT1CQ8TCG5 803 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 SAP25Q8TEE9 199 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 LOC102723996A0A087X1L8 192 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 CFIP05156 583 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 SRYQ05066 204 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 ZNF674Q2M3X9 581 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 SLC25A24Q6NUK1 477 aa7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 CPNE4Q96A23 557 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 DIDO1Q9BTC0 2240 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-215ENST00000512632 HLA-HP01893 362 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 P04436 131 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 LMO1P25800 156 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 OTX2P32243 289 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 GPM6AP51674 278 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 PDZD11Q5EBL8 140 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 OR51H1Q8NH63 302 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 EDARADDQ8WWZ3 215 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 DNAJC13O75165 2243 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 FRYQ5TBA9 3013 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 SRP19P09132 144 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 HNF4GQ14541 408 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 IGFBP7Q16270 282 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 EXT1Q16394 746 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 AKR1C8PQ5T2L2 129 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 LYSMD4Q5XG99 296 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 HEPN1Q6WQI6 88 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 ZNF429Q86V71 674 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 UBALD1Q8TB05 177 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 IFI44Q8TCB0 444 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 ZNF488Q96MN9 340 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 GPR35Q9HC97 309 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 WSB1Q9Y6I7 421 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 ZDBF2Q9HCK1 2354 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 TRAV39A0A0B4J263 110 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 CXCL1P09341 107 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 FOXG1P55316 489 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 CLDN15P56746 228 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 B3GALT5-AS1P59052 145 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 RAB1AP62820 205 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 DLK1P80370 383 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 WDR5BQ86VZ2 330 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 THNSL2Q86YJ6 484 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 IL22RA1Q8N6P7 574 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 AGBL5Q8NDL9 886 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 RDH5Q92781 318 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 MUCL1Q96DR8 90 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 SPIN2AQ99865 258 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 SPIN2BQ9BPZ2 258 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 SF3B5Q9BWJ5 86 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 SLC25A31Q9H0C2 315 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 OR51M1Q9H341 326 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 UBE2ZQ9H832 354 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 CACNA1DQ01668 2161 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 SLC22A20A6NK97 555 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 GJE1A6NN92 205 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 HERPUD1Q15011 391 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 GGNQ86UU5 652 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 ODF3L1Q8IXM7 274 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 CMTM1Q8IZ96 169 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 KDF1Q8NAX2 398 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 OR51B6Q9H340 312 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 R4GN57 208 aa7.95□□□□□ -1.14
LIMCH1-215ENST00000512632 RPL36A-HNRNPH2H7BZ11 118 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 K7ESF4 209 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 MLF1P58340 268 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 RPL23AP62750 156 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 RNASE11Q8TAA1 199 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 TCEAL7Q9BRU2 100 aa7.94□□□□□ -1.14
LIMCH1-215ENST00000512632 LYRM2Q9NU23 88 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms