RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 OR4F5Q8NH21 305 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 BARHL1Q9BZE3 327 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 PPIL3Q9H2H8 161 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 TMEM133Q9H2Q1 129 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 IFT22Q9H7X7 185 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 BEX1Q9HBH7 125 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 PCDHB16Q9NRJ7 776 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 ZNF581Q9P0T4 197 aa13.07□□□□□ -0.32
PDLIM5-216ENST00000511767 A0A1W2PP11 408 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 CLPSL1A2RUU4 121 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 MEGF11A6BM72 1044 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 RGS10O43665 173 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 CSTBP04080 98 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 GDNFP39905 211 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 HSPA13P48723 471 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 PAX5Q02548 391 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 MED22Q15528 200 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 SLC22A6Q4U2R8 563 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 PAN3Q58A45 887 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 SHISA2Q6UWI4 295 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 GLIPR1L1Q6UWM5 242 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 BAIAP2L2Q6UXY1 529 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 Q6ZSV7 163 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 TRAPPC6BQ86SZ2 158 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 ZNF565Q8N9K5 539 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 LINC01006Q8NI28 216 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 MUL1Q969V5 352 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 S100A13Q99584 98 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 SLITRK2Q9H156 845 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 ING3Q9NXR8 418 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 RAB26Q9ULW5 256 aa13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 TBL2Q9Y4P3 447 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-216ENST00000511767 BTBD17A6NE02 478 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 VGLL3A8MV65 326 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 H3BUX3 64 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 GEMIN2O14893 280 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 SC5DO75845 299 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 TSPAN9O75954 239 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 GTF2F2P13984 249 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 CDK2P24941 298 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 KCNJ3P48549 501 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 RAB13P51153 203 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 GPR176Q14439 515 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 ATXN7L3Q14CW9 347 aaPredicted RBP13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 SSX2Q16385 188 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 LRRC75BQ2VPJ9 315 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 RSBN1Q5VWQ0 802 aaPredicted RBP13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 OLFML2AQ68BL7 652 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 OR52W1Q6IF63 320 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 PRSS48Q7RTY5 328 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 CEACAM19Q7Z692 300 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 ABHD12Q8N2K0 398 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 JAGN1Q8N5M9 183 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 SUMF2Q8NBJ7 301 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 OR4D6Q8NGJ1 314 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 PLPPR1Q8TBJ4 325 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 THRSPQ92748 146 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 C16orf95Q9H693 158 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 LINC00574Q9H8X3 128 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 ISYNA1Q9NPH2 558 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 OR6C3Q9NZP0 311 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 KIF25Q9UIL4 384 aa13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 MRPS28Q9Y2Q9 187 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-216ENST00000511767 IGHV2-26A0A0B4J1V2 119 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 KBTBD11-OT1A0A1B0GTJ5 212 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 ZNF729A6NN14 1252 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 SRMP19623 302 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 SERPINA2P20848 420 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 MAPK3P27361 379 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 MAP2K4P45985 399 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 RBM11P57052 281 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 DYNC1I2Q13409 638 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 LY6EQ16553 131 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 RBM48Q5RL73 367 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 UTF1Q5T230 341 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 FAM27D1Q5T7N8 215 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 MINOS1Q5TGZ0 78 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 PRAMEF5Q5TYX0 476 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 SLC35E4Q6ICL7 350 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 BRICD5Q6PL45 260 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 LRRTM1Q86UE6 522 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 RTN4RL2Q86UN3 420 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 MRPS24Q96EL2 167 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 CNBD2Q96M20 576 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 TMED9Q9BVK6 235 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 DPCDQ9BVM2 203 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 CLEC7AQ9BXN2 247 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 GAL3ST2Q9H3Q3 398 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 MINOS1-NBL1R4GNA1 71 aa13.04□□□□□ -0.32
PDLIM5-216ENST00000511767 TRRAPQ9Y4A5 3859 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 MEIKINA0A087WXM9 373 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 A0A087X0M5 115 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 A0A1B0GX30 115 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 NPIPB11E5RHQ5 1161 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 HSPB6O14558 160 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 CLPXO76031 633 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 OR7C1O76099 320 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 IGLV1-47P01700 117 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 CD34P28906 385 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 VHLP40337 213 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms