RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 SIRPB1O00241 398 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 FABP7O15540 132 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 ANXA7P20073 488 aaKnown RBP12.79□□□□□ -0.36
SCLT1-209ENST00000511426 UCP3P55916 312 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 SNRPD2P62316 118 aaKnown RBP12.79□□□□□ -0.36
SCLT1-209ENST00000511426 CBX3Q13185 183 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 TRAT1Q6PIZ9 186 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 TMEM185AQ8NFB2 350 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 ASB13Q8WXK3 278 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 MRGPRFQ96AM1 343 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 DACT3Q96B18 629 aaPredicted RBP12.79□□□□□ -0.36
SCLT1-209ENST00000511426 SAP30LQ9HAJ7 183 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 SLC23A1Q9UHI7 598 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF221Q9UK13 617 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 PCDHB10Q9UN67 800 aa12.79□□□□□ -0.36
SCLT1-209ENST00000511426 DSPP15924 2871 aaKnown RBP12.79□□□□□ -0.36
SCLT1-209ENST00000511426 IGKV1D-8A0A087WSZ0 117 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 IGHV3-64DA0A0J9YX35 117 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 NPIPB11E5RHQ5 1161 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 WNT9BO14905 357 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 TK1P04183 234 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 OR4E1P0C645 316 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 PRDX2P32119 198 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 PPOXP50336 477 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 HLA-DRB3P79483 266 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 SWI5Q1ZZU3 235 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 AADACL3Q5VUY0 350 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 TEX36Q5VZQ5 186 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 C11orf88Q6PI97 169 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 TCTE3Q8IZS6 198 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 MUC15Q8N387 334 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 SPICQ8N5J4 248 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 ZFAND1Q8TCF1 268 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF431Q8TF32 576 aaPredicted RBP12.78□□□□□ -0.36
SCLT1-209ENST00000511426 MAFIPQ8WZ33 124 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 DYRK2Q92630 601 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 SNX22Q96L94 193 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 CABLES2Q9BTV7 478 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 DNTTIP1Q9H147 329 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 OR14J1Q9UGF5 321 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 OPN4Q9UHM6 478 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 VSIG4Q9Y279 399 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 PRR14LQ5THK1 2151 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 ATRXP46100 2492 aa12.78□□□□□ -0.36
SCLT1-209ENST00000511426 HSPB6O14558 160 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 SIAH2O43255 324 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 SSNA1O43805 119 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 FSTL3O95633 263 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 PSG2P11465 335 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 IGFBP2P18065 325 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 CARTPTQ16568 116 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 MST1LQ2TV78 715 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 C4orf46Q504U0 113 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 TMEM128Q5BJH2 165 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 LPCAT3Q6P1A2 487 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF561Q8N587 486 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 PIK3IP1Q96FE7 263 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF486Q96H40 463 aaPredicted RBP12.77□□□□□ -0.36
SCLT1-209ENST00000511426 ZNF2Q9BSG1 426 aaPredicted RBP12.77□□□□□ -0.36
SCLT1-209ENST00000511426 FAM234AQ9H0X4 552 aa12.77□□□□□ -0.36
SCLT1-209ENST00000511426 ACACBO00763 2458 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 FAM221AA4D161 298 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 SULT1A3P0DMM9 295 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 SULT1A4P0DMN0 295 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 VSIG10L2P0DP72 767 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 DHODHQ02127 395 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 ESPL1Q14674 2120 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 C11orf91Q3C1V1 193 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 Q6ZPA2 131 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 TMED4Q7Z7H5 227 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 OR5D13Q8NGL4 314 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 MOB3AQ96BX8 217 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 SDSLQ96GA7 329 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 CYYR1Q96J86 154 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 ST6GAL2Q96JF0 529 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 ZNF222Q9UK12 451 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 TRAPPC2LQ9UL33 140 aa12.77□□□□□ -0.37
SCLT1-209ENST00000511426 C14orf166Q9Y224 244 aaKnown RBP12.77□□□□□ -0.37
SCLT1-209ENST00000511426 SDCBPO00560 298 aaPredicted RBP12.76□□□□□ -0.37
SCLT1-209ENST00000511426 MGST3O14880 152 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 PSPNO60542 156 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 ZNF737O75373 536 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 HPXP02790 462 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 CTSDP07339 412 aaPredicted RBP12.76□□□□□ -0.37
SCLT1-209ENST00000511426 GSTT2P0CG29 244 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 ANXA3P12429 323 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 EGR1P18146 543 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 COL10A1Q03692 680 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 C6orf183Q5T699 404 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 STUMQ69YW2 141 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 C17orf107Q6ZR85 190 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 LYG2Q86SG7 212 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 ANGPTL6Q8NI99 470 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 PLPPR1Q8TBJ4 325 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 MARCH1Q8TCQ1 289 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 FAM216AQ8WUB2 273 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 RAB9BQ9NP90 201 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 KCNIP1Q9NZI2 227 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 ZNF69Q9UC07 566 aa12.76□□□□□ -0.37
SCLT1-209ENST00000511426 ITPR1Q14643 2758 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms