RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 FAM90A20PA6NIJ5 464 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM90A8PA6NJQ4 464 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM90A7PA6NKC0 464 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM90A22PA8MWA6 464 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM90A12PA8MX19 464 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM90A5PA8MXJ8 464 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM90A23PA8MXZ1 464 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 CDK2AP1O14519 115 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 EPPINO95925 133 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM90A15PP0C7V4 464 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM90A13PP0C7W8 464 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM90A14PP0C7W9 464 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM90A24PP0C7X0 464 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 LRRC10Q5BKY1 277 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM78BQ5VT40 261 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 C6orf201Q7Z4U5 140 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 RPS20P60866 119 aaKnown RBP7.44□□□□□ -1.22
HTT-208ENST00000510626 GAMTQ14353 236 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 BOD1L2Q8IYS8 172 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 GRAMD2BQ96HH9 432 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 MEGF10Q96KG7 1140 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 TNFSF15O95150 251 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 PSMB2P49721 201 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 CA13Q8N1Q1 262 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 PPP1R3EQ9H7J1 279 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 IL19Q9UHD0 177 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 F11P03951 625 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 EDDM3AQ14507 147 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 CBLN2Q8IUK8 224 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 GNB4Q9HAV0 340 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 MED12LQ86YW9 2145 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 PLA2G10O15496 165 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 GLIPR1P48060 266 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 FAM78AQ5JUQ0 283 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 RAB33BQ9H082 229 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 SBF2Q86WG5 1849 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 PTPRFP10586 1907 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 PI3P19957 117 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 Q6AWC8 147 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 C11orf42Q8N5U0 333 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 MS4A3Q96HJ5 214 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 ZNF355PQ9NSJ1 428 aa7.44□□□□□ -1.22
HTT-208ENST00000510626 CHST1O43916 411 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 MELTFP08582 738 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 CHST5Q9GZS9 411 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 TUBD1Q9UJT1 453 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 OR4A8P0C604 315 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 ACP1P24666 158 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 FBLL1A6NHQ2 334 aaKnown RBP7.43□□□□□ -1.22
HTT-208ENST00000510626 UBE2CO00762 179 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 HPXP02790 462 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 SLC25A5P05141 298 aaKnown RBP7.43□□□□□ -1.22
HTT-208ENST00000510626 A0A1W2PQD3 144 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 CST9Q5W186 159 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 LIPGQ9Y5X9 500 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 METAP1P53582 386 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 RAB32Q13637 225 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 MYADML2A6NDP7 307 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 RECKO95980 971 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 DYNLT3P51808 116 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 ZNF253O75346 499 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 CXCL12P48061 93 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 GAGE1Q13065 139 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 ZNF79Q15937 498 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 KCNMB1Q16558 191 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 MBNL1Q9NR56 388 aaKnown RBP7.43□□□□□ -1.22
HTT-208ENST00000510626 CISD1Q9NZ45 108 aaKnown RBP7.43□□□□□ -1.22
HTT-208ENST00000510626 YLPM1P49750 1951 aaKnown RBP7.43□□□□□ -1.22
HTT-208ENST00000510626 KLKB1P03952 638 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
HTT-208ENST00000510626 TMEM30BQ3MIR4 351 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 MSRB3Q8IXL7 192 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 OR1P1Q8NH06 330 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 TBX15Q96SF7 602 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 PSMG3Q9BT73 122 aaPredicted RBP7.43□□□□□ -1.22
HTT-208ENST00000510626 C1QTNF6Q9BXI9 259 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 NPIPB13A6NJU9 1138 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 NPIPB4C9JG80 1138 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 MEOX1P50221 254 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 PARD6GQ9BYG4 376 aaPredicted RBP7.43□□□□□ -1.22
HTT-208ENST00000510626 KCNE5Q9UJ90 142 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 MS4A18H0YCH9 400 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 TUSC1Q2TAM9 212 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 MS4A18Q3C1V0 323 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 SCGB1D4Q6XE38 83 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 ZCCHC14Q8WYQ9 949 aaKnown RBP7.43□□□□□ -1.22
HTT-208ENST00000510626 CDCP1Q9H5V8 836 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 MED13LQ71F56 2210 aa7.43□□□□□ -1.22
HTT-208ENST00000510626 S100A4P26447 101 aaKnown RBP7.42□□□□□ -1.22
HTT-208ENST00000510626 RPL11P62913 178 aaKnown RBP7.42□□□□□ -1.22
HTT-208ENST00000510626 C19orf67A6NJJ6 358 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 HOXD4P09016 255 aaPredicted RBP7.42□□□□□ -1.22
HTT-208ENST00000510626 OR10V1Q8NGI7 309 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 OR1L6Q8NGR2 347 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 OR51B6Q9H340 312 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 SLC7A10Q9NS82 523 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 OOEPA6NGQ2 149 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 SRSF10O75494 262 aaKnown RBP7.42□□□□□ -1.22
HTT-208ENST00000510626 LPAR6P43657 344 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 MEF2BQ02080 365 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms