RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 C16orf87Q6PH81 154 aa11□□□□□ -0.65
SNF8-206ENST00000509989 TRAPPC6BQ86SZ2 158 aa11□□□□□ -0.65
SNF8-206ENST00000509989 UBALD1Q8TB05 177 aa11□□□□□ -0.65
SNF8-206ENST00000509989 PIFOQ8TCI5 191 aa11□□□□□ -0.65
SNF8-206ENST00000509989 DYRK2Q92630 601 aa11□□□□□ -0.65
SNF8-206ENST00000509989 UFD1Q92890 307 aa11□□□□□ -0.65
SNF8-206ENST00000509989 FAM46BQ96A09 425 aa11□□□□□ -0.65
SNF8-206ENST00000509989 SLC25A28Q96A46 364 aa11□□□□□ -0.65
SNF8-206ENST00000509989 C1RLQ9NZP8 487 aa11□□□□□ -0.65
SNF8-206ENST00000509989 GLS2Q9UI32 602 aa11□□□□□ -0.65
SNF8-206ENST00000509989 GPR137BO60478 399 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 IGHV3-7P01780 117 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 ARG1P05089 322 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 CSN2P05814 226 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 CDK2P24941 298 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 CFPP27918 469 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 SRSF4Q08170 494 aaKnown RBP10.99□□□□□ -0.65
SNF8-206ENST00000509989 MLLT11Q13015 90 aaPredicted RBP10.99□□□□□ -0.65
SNF8-206ENST00000509989 AWAT2Q6E213 333 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 CORO2AQ92828 525 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 LEAP2Q969E1 77 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 FOXRED1Q96CU9 486 aaPredicted RBP10.99□□□□□ -0.65
SNF8-206ENST00000509989 DPCDQ9BVM2 203 aaPredicted RBP10.99□□□□□ -0.65
SNF8-206ENST00000509989 RHOFQ9HBH0 211 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 ZNF286AQ9HBT8 521 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 CKLFQ9UBR5 152 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 FAM96BQ9Y3D0 163 aa10.99□□□□□ -0.65
SNF8-206ENST00000509989 IGHV2-26A0A0B4J1V2 119 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 FAM90A8PA6NJQ4 464 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 H3BUX3 64 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 CLPXO76031 633 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 OR7C1O76099 320 aaPredicted RBP10.98□□□□□ -0.65
SNF8-206ENST00000509989 FBP1P09467 338 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 SRMP19623 302 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 COMPP49747 757 aaPredicted RBP10.98□□□□□ -0.65
SNF8-206ENST00000509989 KRTAP10-3P60369 221 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 PLA2G7Q13093 441 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 GPR50Q13585 617 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 TBCEQ15813 527 aaPredicted RBP10.98□□□□□ -0.65
SNF8-206ENST00000509989 NHLRC3Q5JS37 347 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 ATAD3CQ5T2N8 411 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 ZNF626Q68DY1 528 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 C12orf54Q6X4T0 127 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 SPARTQ8N0X7 666 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 MS4A15Q8N5U1 240 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 CHST4Q8NCG5 386 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 BEND2Q8NDZ0 799 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 OR11H6Q8NGC7 330 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 RFESDQ8TAC1 157 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 MRGPRDQ8TDS7 321 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 SSMEM1Q8WWF3 244 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 RBMXL1Q96E39 390 aaKnown RBP10.98□□□□□ -0.65
SNF8-206ENST00000509989 HEXA-AS1Q9H8Q6 139 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 ISYNA1Q9NPH2 558 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 UBE2J1Q9Y385 318 aaPredicted RBP10.98□□□□□ -0.65
SNF8-206ENST00000509989 AK6Q9Y3D8 172 aaKnown RBP10.98□□□□□ -0.65
SNF8-206ENST00000509989 SESN1Q9Y6P5 492 aa10.98□□□□□ -0.65
SNF8-206ENST00000509989 MEIKINA0A087WXM9 373 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 A0A0A6YYD4 124 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 CSTBP04080 98 aaKnown RBP10.97□□□□□ -0.65
SNF8-206ENST00000509989 VSIG8P0DPA2 414 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 CD37P11049 281 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 MGMTP16455 207 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 SSTR5P35346 364 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 GLP1RP43220 463 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 DYNC1I2Q13409 638 aaKnown RBP10.97□□□□□ -0.65
SNF8-206ENST00000509989 UNC119Q13432 240 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 P2RY14Q15391 338 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 LTC4SQ16873 150 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 MIDNQ504T8 468 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 HSD17B12Q53GQ0 312 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 C1orf100Q5SVJ3 147 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 HIST2H2BDQ6DRA6 164 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 CCBE1Q6UXH8 406 aaPredicted RBP10.97□□□□□ -0.65
SNF8-206ENST00000509989 PPP1R35Q8TAP8 253 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 TBC1D15Q8TC07 691 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 CCDC107Q8WV48 283 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 CPNE2Q96FN4 548 aaPredicted RBP10.97□□□□□ -0.65
SNF8-206ENST00000509989 SSX3Q99909 188 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 NICN1Q9BSH3 213 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 SELENOIQ9C0D9 397 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 TMEM133Q9H2Q1 129 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 TCF7L1Q9HCS4 588 aa10.97□□□□□ -0.65
SNF8-206ENST00000509989 TRGV10A0A0A0MS01 117 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 A0A1W2PPH5 198 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 CHST1O43916 411 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 CRTAPO75718 401 aaPredicted RBP10.96□□□□□ -0.65
SNF8-206ENST00000509989 PAHP00439 452 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 RBP4P02753 201 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 GTF2F2P13984 249 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 MAPK3P27361 379 aaPredicted RBP10.96□□□□□ -0.65
SNF8-206ENST00000509989 CLDN12P56749 244 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 GABARAPL2P60520 117 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 QRFPP83859 136 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 SSX2Q16385 188 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 HEPN1Q6WQI6 88 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 Q6ZPA2 131 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 ZNF367Q7RTV3 350 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 TMEM86BQ8N661 226 aa10.96□□□□□ -0.65
SNF8-206ENST00000509989 OR4P4Q8NGL7 312 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms