RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 BCAT2O15382 392 aaPredicted RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 SLC2A10O95528 541 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 OR2H2O95918 312 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 SPINK8P0C7L1 97 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ELNP15502 786 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 FSTP19883 344 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 VDAC1P21796 283 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 CAMPP49913 170 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ZNF718Q3SXZ3 478 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 VMA21Q3ZAQ7 101 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 CD300EQ496F6 205 aaPredicted RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 SPANXN5Q5MJ07 72 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 RHBDD2Q6NTF9 364 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 KLHDC8AQ8IYD2 350 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 NPEPL1Q8NDH3 523 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 OR2Z1Q8NG97 314 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 OR10G6Q8NH81 332 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 TIMD4Q96H15 378 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 RHOVQ96L33 236 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 NEU1Q99519 415 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 LRRC61Q9BV99 259 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 BOCQ9BWV1 1114 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 MRPL32Q9BYC8 188 aaKnown RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 MRPL18Q9H0U6 180 aaKnown RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 LPAR5Q9H1C0 372 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 LAMB1P07942 1786 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 LAMB2P55268 1798 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 DDX60LQ5H9U9 1706 aaKnown RBP3.17□□□□□ -1.9
USP53-205ENST00000509769 TMED7-TICAM2A0A0A6YYA0 188 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 MYADML2A6NDP7 307 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 LRRC30A6NM36 301 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 KIR2DS3K7RE56 304 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 CST7O76096 145 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 KLK3P07288 261 aaPredicted RBP3.17□□□□□ -1.9
USP53-205ENST00000509769 FGF5P12034 268 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 PSMB5P28074 263 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 VIPR2P41587 438 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 DUSP3P51452 185 aaPredicted RBP3.17□□□□□ -1.9
USP53-205ENST00000509769 MVDP53602 400 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 VGLL4Q14135 290 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 KIR2DS3Q14952 304 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 HSF5Q4G112 596 aaPredicted RBP3.17□□□□□ -1.9
USP53-205ENST00000509769 PKDCCQ504Y2 493 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 PYY3Q5JQD4 70 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 DGAT2L7PQ6IED9 249 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 STAC2Q6ZMT1 411 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 PQLC2Q6ZP29 291 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 CLEC20AQ6ZU45 233 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 SLC36A1Q7Z2H8 476 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 SPRED2Q7Z698 418 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 SCCPDHQ8NBX0 429 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 OR10D3Q8NH80 312 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 OR2V1Q8NHB1 315 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 PPDPFLQ8WWR9 84 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 ERGIC1Q969X5 290 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 FUBP1Q96AE4 644 aaKnown RBP3.17□□□□□ -1.9
USP53-205ENST00000509769 RPRMQ9NS64 109 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 FGF21Q9NSA1 209 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 IL36AQ9UHA7 158 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 TCRBV5S2A0A599 114 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 B4DGG1 531 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 H3BRM9 83 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 RRHO14718 337 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 DSCR3O14972 297 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 PAGE4O60829 102 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 ZNF205O95201 554 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 GASTP01350 101 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 IGHA1P01876 353 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 IGHA2P01877 340 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 RNF224P0DH78 156 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 CKS2P33552 79 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 PSMB10P40306 273 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 RABIFP47224 123 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 TBPL1P62380 186 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 RPS24P62847 133 aaKnown RBP3.17□□□□□ -1.9
USP53-205ENST00000509769 PPP1R1AQ13522 171 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 ELAVL1Q15717 326 aaKnown RBP3.17□□□□□ -1.9
USP53-205ENST00000509769 SPRED3Q2MJR0 410 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 LINC01545Q5VT33 79 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 YOD1Q5VVQ6 348 aaPredicted RBP3.17□□□□□ -1.9
USP53-205ENST00000509769 TXNDC8Q6A555 127 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 LAIR1Q6GTX8 287 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 RTN4RL2Q86UN3 420 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 LRTM2Q8N967 370 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 FAM181AQ8N9Y4 354 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 SYT8Q8NBV8 401 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 ZNF480Q8WV37 535 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 AQP3Q92482 292 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 NSUN3Q9H649 340 aaKnown RBP3.17□□□□□ -1.9
USP53-205ENST00000509769 MSL2Q9HCI7 577 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 GNG12Q9UBI6 72 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 TAC3Q9UHF0 121 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 PIGLQ9Y2B2 252 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 INSL6Q9Y581 213 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 CD3DP04234 171 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 UMODP07911 640 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 HOXB3P14651 431 aaPredicted RBP3.17□□□□□ -1.9
USP53-205ENST00000509769 PPICP45877 212 aa3.17□□□□□ -1.9
USP53-205ENST00000509769 SUMO3P55854 103 aaPredicted RBP3.17□□□□□ -1.9
USP53-205ENST00000509769 HHEXQ03014 270 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms