RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 OR10Z1Q8NGY1 313 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 AKR1E2Q96JD6 320 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 TMEM56Q96MV1 263 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 MTCH1Q9NZJ7 389 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 TMEM56-RWDD3S4R434 201 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 NKX2-6A6NCS4 301 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 FAM157AC9JC47 383 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 C9JQL5 133 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 SCTP09683 121 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 NKX2-1P43699 371 aaPredicted RBP15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 DCAF10Q5QP82 559 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 LINC00696Q6ZRV3 163 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 TMEM251Q8N6I4 163 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 ARRDC1-AS1Q9H2J1 176 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 PLK3Q9H4B4 646 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 PLA2G3Q9NZ20 509 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 CRIM1Q9NZV1 1036 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 ZNF503-AS2A6NEH8 195 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 KCNJ3P48549 501 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 PPT1P50897 306 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 EWSR1Q01844 656 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 RNPS1Q15287 305 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 OR2C3Q8N628 320 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 HSD17B11Q8NBQ5 300 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 BOD1Q96IK1 185 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 POM121L2Q96KW2 1035 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 SPACA1Q9HBV2 294 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 C19orf12Q9NSK7 152 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 CACFD1Q9UGQ2 172 aa15.38■□□□□ 0.05
CCHCR1-228ENST00000509552 HSPB6O14558 160 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 NGFP01138 241 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 ZNF818PQ6ZRF7 136 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 GAPTQ8N292 157 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 HS3ST6Q96QI5 342 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 USB1Q9BQ65 265 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 RIMS4Q9H426 269 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 ATP23Q9Y6H3 246 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 ANKRD30BLA7E2S9 258 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 CD300LBA8K4G0 201 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 SS18L1O75177 396 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 PRKACAP17612 351 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 TSC22D1Q15714 1073 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 GUK1Q16774 197 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 LINC00596Q86U02 117 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 SELENOHQ8IZQ5 122 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 EIF5A2Q9GZV4 153 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 IL36RNQ9UBH0 155 aa15.37■□□□□ 0.05
CCHCR1-228ENST00000509552 DUXBA0A1W2PPF3 345 aa15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 SLC22A20A6NK97 555 aa15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 APLNRP35414 380 aa15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 ZNF266Q14584 549 aa15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 AVPI1Q5T686 147 aa15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 CMTM1Q8IZ96 169 aa15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 ABHD14BQ96IU4 210 aa15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 SLC25A31Q9H0C2 315 aa15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 SH3BGRL3Q9H299 93 aa15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 ZNF552Q9H707 407 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 SMCO4Q9NRQ5 59 aa15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 ZNF175Q9Y473 711 aa15.36■□□□□ 0.05
CCHCR1-228ENST00000509552 SLC34A2O95436 690 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 RAB13P51153 203 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 UCP2P55851 309 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 VAMP2P63027 116 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 SUMF1Q8NBK3 374 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 FREM1Q5H8C1 2179 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 ZDBF2Q9HCK1 2354 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 FAM24AA6NFZ4 105 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 HSD17B6O14756 317 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 SYNGR1O43759 233 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 TUSC2O75896 110 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 POLR2GP62487 172 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 HERPUD1Q15011 391 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 C5orf24Q7Z6I8 188 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 ZNF573Q86YE8 665 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 OR5P3Q8WZ94 311 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 GTF3AQ92664 365 aaKnown RBP15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 PLEKHF2Q9H8W4 249 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 MPC1Q9Y5U8 109 aa15.35■□□□□ 0.05
CCHCR1-228ENST00000509552 ADAM20O43506 726 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 S100GP29377 79 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 FHITP49789 147 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 AKIRIN2Q53H80 203 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 NUFIP2Q7Z417 695 aaKnown RBP15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 SUMF2Q8NBJ7 301 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 RXFP4Q8TDU9 374 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 PBDC1Q9BVG4 233 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 C11orf1Q9H5F2 150 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 TNRC6AQ8NDV7 1962 aaKnown RBP15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 IGKV1D-13A0A0B4J2D9 117 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 OR5B21A6NL26 309 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 IGKV1-13P0DP09 117 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 UCP1P25874 307 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 TMEM182Q6ZP80 229 aaPredicted RBP15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 SNIP1Q8TAD8 396 aaKnown RBP15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 CCL28Q9NRJ3 127 aa15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 KLF13Q9Y2Y9 288 aaPredicted RBP15.34■□□□□ 0.05
CCHCR1-228ENST00000509552 SSSCA1O60232 199 aa15.33■□□□□ 0.05
CCHCR1-228ENST00000509552 C1QL1O75973 258 aa15.33■□□□□ 0.05
CCHCR1-228ENST00000509552 CRYBA1P05813 215 aa15.33■□□□□ 0.05
CCHCR1-228ENST00000509552 VDAC1P21796 283 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms