RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 A0A0G2JK05 382 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 ODF3BA8MYP8 253 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 HSPB6O14558 160 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 TOX4O94842 621 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 MELTFP08582 738 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 SMIM18P0DKX4 95 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 LMO1P25800 156 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 BDKRB2P30411 391 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 GLIPR1P48060 266 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 RBM11P57052 281 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 QRFPP83859 136 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 EMX1Q04741 257 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 UNC119Q13432 240 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 ATXN7L3Q14CW9 347 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 MED22Q15528 200 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 ACSM3Q53FZ2 586 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 LRRC10Q5BKY1 277 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 NHLRC3Q5JS37 347 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 RBM48Q5RL73 367 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 PRAMEF5Q5TYX0 476 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 UBE2UQ5VVX9 321 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 RSBN1Q5VWQ0 802 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 ELP2Q6IA86 826 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 OR10K2Q6IF99 312 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 CD200R1LQ6Q8B3 271 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 ZNF782Q6ZMW2 699 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 ZNF367Q7RTV3 350 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 LYSMD2Q8IV50 215 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 ZNF561Q8N587 486 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 ASCC1Q8N9N2 400 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 ZSCAN4Q8NAM6 433 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 OR51T1Q8NGJ9 327 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 NANPQ8TBE9 248 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 TMEM203Q969S6 136 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 SLC25A28Q96A46 364 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 FAM192AQ9GZU8 254 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 VCX3BQ9H321 246 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 SEBOXQ9HB31 216 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 IL36GQ9NZH8 169 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 RCC2Q9P258 522 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 ERGIC3Q9Y282 383 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 GSTK1Q9Y2Q3 226 aa5.86□□□□□ -1.47
TOPBP1-207ENST00000509162 FOXI3A8MTJ6 420 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 NOTOA8MTQ0 251 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 C17orf98A8MV24 154 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 M0R1W7 72 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 GEMIN2O14893 280 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 TCF21O43680 179 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 ECDO95905 644 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 SERPINA3P01011 423 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 IGHV4-59P01825 116 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 MAS1P04201 325 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 LIPFP07098 398 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 CGB3P0DN86 165 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 CGB7P0DN87 165 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 TMEM225BP0DP42 221 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 SERPINA2P20848 420 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 COX7A1P24310 79 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 SAA4P35542 130 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 ZNF93P35789 620 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 PTGFRP43088 359 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 CAPZA1P52907 286 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 P2RX3P56373 397 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 OR10A3P58181 314 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 RPL31P62899 125 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 SLC9A3R2Q15599 337 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 GRK1Q15835 563 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 TAF9Q16594 264 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 C17orf58Q2M2W7 97 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 SPIN3Q5JUX0 258 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 CD276Q5ZPR3 534 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 ZNF773Q6PK81 442 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 USP43Q70EL4 1123 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 LHFPL4Q7Z7J7 247 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 LDLRAD3Q86YD5 345 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 PNLDC1Q8NA58 520 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 OR5D14Q8NGL3 314 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 OR13A1Q8NGR1 328 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 MYDGFQ969H8 173 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 RBMXL1Q96E39 390 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 MED30Q96HR3 178 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 SNX22Q96L94 193 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 MGLLQ99685 303 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 CCDC90BQ9GZT6 254 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 FAM234AQ9H0X4 552 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 RNF167Q9H6Y7 350 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 NEK6Q9HC98 313 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 EXOSC4Q9NPD3 245 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 ISYNA1Q9NPH2 558 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 TMEM138Q9NPI0 162 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 NDUFB11Q9NX14 153 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 SCN3BQ9NY72 215 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 FOXJ3Q9UPW0 622 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 MRPS28Q9Y2Q9 187 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 TPRKBQ9Y3C4 175 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 VWFP04275 2813 aa5.85□□□□□ -1.47
TOPBP1-207ENST00000509162 FBN3Q75N90 2809 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 A0A0B4J203 849 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 A0A1W2PQ09 198 aa5.84□□□□□ -1.47
TOPBP1-207ENST00000509162 SMIM30A4D0T7 59 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms