RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 BIDP55957 195 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 TCTN1Q2MV58 587 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 SMIM21Q3B7S5 101 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 SNAI3Q3KNW1 292 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 ASTLQ6HA08 431 aaPredicted RBP8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 PRSS57Q6UWY2 283 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 CPEB2Q7Z5Q1 589 aaKnown RBP8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 TMEM144Q7Z5S9 345 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 ATG4DQ86TL0 474 aaPredicted RBP8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 CALHM1Q8IU99 346 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 FAM89BQ8N5H3 189 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 KLHDC1Q8N7A1 406 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 STARD4Q96DR4 205 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 ABHD14BQ96IU4 210 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 S1PR5Q9H228 398 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 RPRMQ9NS64 109 aa8.7□□□□□ -1.02
PDGFRA-207ENST00000509092 PCNX3Q9H6A9 2034 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 IGKV1D-8A0A087WSZ0 117 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 A0A0U1RQK1 487 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 A0A1W2PP11 408 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 A0A1W2PRS3 328 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 PRSS37A4D1T9 235 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 FOXI3A8MTJ6 420 aaPredicted RBP8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 SERPINE3A8MV23 424 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF814B7Z6K7 855 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 TNFRSF10CO14798 259 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 CT62P0C5K7 136 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF728P0DKX0 622 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 TSPOP30536 169 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 NKX2-1P43699 371 aaPredicted RBP8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 PPP1CBP62140 327 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 MRPS34P82930 218 aaKnown RBP8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 MGAT2Q10469 447 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF726P1Q15940 193 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 WBP2NLQ6ICG8 309 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 RNF144BQ7Z419 303 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 ODF3L1Q8IXM7 274 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF440Q8IYI8 595 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 SAXO1Q8IYX7 474 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 OR5B3Q8NH48 314 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 PECRQ9BY49 303 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 NKX2-4Q9H2Z4 354 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 THAP10Q9P2Z0 257 aaPredicted RBP8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 CPAMD8Q8IZJ3 1885 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 AQP7P3A6NL99 342 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 AHRRA9YTQ3 701 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 TMEM250H0YL14 139 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 MSTNO14793 375 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 SSSCA1O60232 199 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 SERF1AO75920 110 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 CST7O76096 145 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 GYPAP02724 150 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 PSG1P11464 419 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 SELPP16109 830 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 OR1D2P34982 312 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 ARR3P36575 388 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 HYAL1Q12794 435 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 FAM78BQ5VT40 261 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 PARS2Q7L3T8 475 aaKnown RBP8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 OR51T1Q8NGJ9 327 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF519Q8TB69 540 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 TMEM234Q8WY98 164 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 FAM3CQ92520 227 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 ARRDC3Q96B67 414 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 SPACA5Q96QH8 159 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 RYDENQ9NUL5 291 aaKnown RBP8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF586Q9NXT0 402 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 FBXL7Q9UJT9 491 aa8.69□□□□□ -1.02
PDGFRA-207ENST00000509092 ALPK2Q86TB3 2170 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 TET1Q8NFU7 2136 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 IGHV2-26A0A0B4J1V2 119 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 TRAV34A0A0B4J273 112 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 A0A1W2PNV4 684 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 GRIFINA4D1Z8 144 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 SERINC4A6NH21 518 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 HS3ST1O14792 307 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF737O75373 536 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 HLA-HP01893 362 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 MEF2BQ02080 365 aaPredicted RBP8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 NHLH1Q02575 133 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 EGR4Q05215 589 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 TSPO2Q5TGU0 170 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 PNKDQ8N490 385 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 TMEM217Q8N7C4 229 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 TCTEX1D1Q8N7M0 179 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 OR4N2Q8NGD1 307 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 OR52R1Q8NGF1 315 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 PINX1Q96BK5 328 aaKnown RBP8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 LRRC3BQ96PB8 259 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 RAB11FIP5Q9BXF6 653 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 SAMD10Q9BYL1 202 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 PARLQ9H300 379 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF160Q9HCG1 818 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 SOHLH2Q9NX45 425 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 DAPP1Q9UN19 280 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 IGLC7A0M8Q6 106 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 NKX2-6A6NCS4 301 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 B3GALT2O43825 422 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 VENTXO95231 258 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 IFNA5P01569 189 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms