RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 HTR3BO95264 441 aa16.15■□□□□ 0.18
SFXN1-209ENST00000508290 ARG1P05089 322 aa16.15■□□□□ 0.18
SFXN1-209ENST00000508290 CREB3L1Q96BA8 519 aa16.15■□□□□ 0.18
SFXN1-209ENST00000508290 NR1H4Q96RI1 486 aaPredicted RBP16.15■□□□□ 0.18
SFXN1-209ENST00000508290 UQCC2Q9BRT2 126 aa16.15■□□□□ 0.18
SFXN1-209ENST00000508290 ISYNA1Q9NPH2 558 aa16.15■□□□□ 0.18
SFXN1-209ENST00000508290 GHRLQ9UBU3 117 aa16.15■□□□□ 0.18
SFXN1-209ENST00000508290 TRAV8-7A0A075B6U6 113 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 CLPSL1A2RUU4 121 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 H3BUX3 64 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 CDRT1O95170 752 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 GLIPR1P48060 266 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 RBM11P57052 281 aaKnown RBP16.14■□□□□ 0.17
SFXN1-209ENST00000508290 IRF3Q14653 427 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 MED22Q15528 200 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 TRAM1Q15629 374 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 OLFML2AQ68BL7 652 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 JAGN1Q8N5M9 183 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 OR4D6Q8NGJ1 314 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 ZNF596Q8TC21 504 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 PHYHIPQ92561 330 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 COQ2Q96H96 371 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 AJUBAQ96IF1 538 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 RAB26Q9ULW5 256 aa16.14■□□□□ 0.17
SFXN1-209ENST00000508290 LSM2Q9Y333 95 aaKnown RBP16.14■□□□□ 0.17
SFXN1-209ENST00000508290 IGHV2-26A0A0B4J1V2 119 aa16.13■□□□□ 0.17
SFXN1-209ENST00000508290 TRAV24A0A0B4J272 114 aa16.13■□□□□ 0.17
SFXN1-209ENST00000508290 MDKP21741 143 aaPredicted RBP16.13■□□□□ 0.17
SFXN1-209ENST00000508290 CRHBPP24387 322 aa16.13■□□□□ 0.17
SFXN1-209ENST00000508290 PSMA1P25786 263 aaKnown RBP16.13■□□□□ 0.17
SFXN1-209ENST00000508290 DYNLT3P51808 116 aa16.13■□□□□ 0.17
SFXN1-209ENST00000508290 DYNC1I2Q13409 638 aaKnown RBP16.13■□□□□ 0.17
SFXN1-209ENST00000508290 ATXN7L3Q14CW9 347 aaPredicted RBP16.13■□□□□ 0.17
SFXN1-209ENST00000508290 PIGYQ3MUY2 71 aa16.13■□□□□ 0.17
SFXN1-209ENST00000508290 RBM48Q5RL73 367 aaKnown RBP16.13■□□□□ 0.17
SFXN1-209ENST00000508290 PRSS48Q7RTY5 328 aa16.13■□□□□ 0.17
SFXN1-209ENST00000508290 UFD1Q92890 307 aa16.13■□□□□ 0.17
SFXN1-209ENST00000508290 C16orf95Q9H693 158 aa16.13■□□□□ 0.17
SFXN1-209ENST00000508290 TCF7L1Q9HCS4 588 aa16.13■□□□□ 0.17
SFXN1-209ENST00000508290 PITPNC1Q9UKF7 332 aa16.13■□□□□ 0.17
SFXN1-209ENST00000508290 MRPS28Q9Y2Q9 187 aaKnown RBP16.13■□□□□ 0.17
SFXN1-209ENST00000508290 TSPAN9O75954 239 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 OR7C1O76099 320 aaPredicted RBP16.12■□□□□ 0.17
SFXN1-209ENST00000508290 ATP6V1G2O95670 118 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 SERPINA2P20848 420 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 OMGP23515 440 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 CDK2P24941 298 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 CD34P28906 385 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 ARHGDIBP52566 201 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 RELBQ01201 579 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 SLC22A6Q4U2R8 563 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 ACSM3Q53FZ2 586 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 C11orf88Q6PI97 169 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 UNQ9370/PRO34162Q6UXP9 181 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 OR10A7Q8NGE5 316 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 OR10K1Q8NGX5 313 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 DPCDQ9BVM2 203 aaPredicted RBP16.12■□□□□ 0.17
SFXN1-209ENST00000508290 RANBP3Q9H6Z4 567 aaPredicted RBP16.12■□□□□ 0.17
SFXN1-209ENST00000508290 ABCB10Q9NRK6 738 aa16.12■□□□□ 0.17
SFXN1-209ENST00000508290 MEIKINA0A087WXM9 373 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 A0A087X0M5 115 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 KBTBD11-OT1A0A1B0GTJ5 212 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 A0A1B0GX30 115 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A10PA6NDY2 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A18PA6NE21 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A16PA6NEW6 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A20PA6NIJ5 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A7PA6NKC0 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A22PA8MWA6 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A12PA8MX19 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A5PA8MXJ8 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A23PA8MXZ1 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A15PP0C7V4 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A13PP0C7W8 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A14PP0C7W9 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 FAM90A24PP0C7X0 464 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 UBBP0CG47 229 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 HTR1DP28221 377 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 CEACAM3P40198 252 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 VHLP40337 213 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 RANBP1P43487 201 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 RBM39Q14498 530 aaKnown RBP16.11■□□□□ 0.17
SFXN1-209ENST00000508290 AWAT2Q6E213 333 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 MUL1Q969V5 352 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 ORAI1Q96D31 301 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 OR5M11Q96RB7 305 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 Q9H521 79 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 LINC00574Q9H8X3 128 aa16.11■□□□□ 0.17
SFXN1-209ENST00000508290 A0A1W2PPK0 400 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 MEX3AA1L020 520 aaKnown RBP16.1■□□□□ 0.17
SFXN1-209ENST00000508290 PIN1P1O15428 100 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 MAS1P04201 325 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 PRRX1P54821 245 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 MLLT11Q13015 90 aaPredicted RBP16.1■□□□□ 0.17
SFXN1-209ENST00000508290 TPBGQ13641 420 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 RSBN1Q5VWQ0 802 aaPredicted RBP16.1■□□□□ 0.17
SFXN1-209ENST00000508290 SLC35E4Q6ICL7 350 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 GLIPR1L1Q6UWM5 242 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 SLC16A12Q6ZSM3 486 aa16.1■□□□□ 0.17
SFXN1-209ENST00000508290 ABHD12Q8N2K0 398 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms