RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 SIGLEC12Q96PQ1 595 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 ALKBH3Q96Q83 286 aaPredicted RBP11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 PROK2Q9HC23 129 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 NOSIPQ9Y314 301 aaKnown RBP11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 TMEM56-RWDD3S4R434 201 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 IGKV1D-13A0A0B4J2D9 117 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 BTBD17A6NE02 478 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF732B4DXR9 585 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 TP53I11O14683 189 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNHIT1O43257 154 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 HSPA12AO43301 675 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 IGKV1-13P0DP09 117 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 FKBP2P26885 142 aaKnown RBP11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 RPL23AP62750 156 aaKnown RBP11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 EXT1Q16394 746 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 TMEM211Q6ICI0 200 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 GAPTQ8N292 157 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 CPNE4Q96A23 557 aaPredicted RBP11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 NIPSNAP3BQ9BS92 247 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 SLC25A31Q9H0C2 315 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 PRDM13Q9H4Q3 707 aa11.56□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF407Q9C0G0 2248 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF587BE7ETH6 402 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 VAMP5O95183 116 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 HSPB1P04792 205 aaKnown RBP11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 SCTP09683 121 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 JMJD7P0C870 316 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 FUT3P21217 361 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 GLIPR1P48060 266 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 SRPXP78539 464 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 AKR1C8PQ5T2L2 129 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 SLC25A26Q70HW3 274 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 HIST3H2BBQ8N257 126 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 RARRES3Q9UL19 164 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 hCG_38984A0A1B0GV85 526 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 OR6C6A6NF89 314 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 H3BP45 60 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 CHST1O43916 411 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 LIFP15018 202 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 PSG4Q00888 419 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 OR8B8Q15620 311 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 KHDC3LQ587J8 217 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 NMSQ5H8A3 153 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 GUSBP11Q6P575 273 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 CMTM1Q8IZ96 169 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 GPR137CQ8N3F9 429 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 IL22RA1Q8N6P7 574 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 ZNF611Q8N823 705 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 SNIP1Q8TAD8 396 aaKnown RBP11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 HS3ST6Q96QI5 342 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 TMEM38BQ9NVV0 291 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 IL36GQ9NZH8 169 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 DKKL1Q9UK85 242 aa11.55□□□□□ -0.56
SNCAIP-209ENST00000508017 A0A087WZY1 265 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 HSPB6O14558 160 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 TNFSF12O43508 249 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 FUT6P51993 359 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 PAX9P55771 341 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 DEFA6Q01524 100 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 PCOLCEQ15113 449 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 ABHD5Q8WTS1 349 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 FRZBQ92765 325 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 EXTL1Q92935 676 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 GNPNAT1Q96EK6 184 aaPredicted RBP11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 SPIN2AQ99865 258 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 SPIN2BQ9BPZ2 258 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 A0A1W2PQM1 296 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 SEC14L6B5MCN3 397 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 CST2P09228 141 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 TRGC1P0CF51 173 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 ID3Q02535 119 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 HERPUD1Q15011 391 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 FAM185AQ8N0U4 392 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 OPA3Q9H6K4 179 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 SIRT7Q9NRC8 400 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 CCL28Q9NRJ3 127 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 PLSCR2Q9NRY7 297 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 GNG13Q9P2W3 67 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 IL36RNQ9UBH0 155 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 C19orf25Q9UFG5 118 aaPredicted RBP11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 TCFL5Q9UL49 500 aa11.54□□□□□ -0.56
SNCAIP-209ENST00000508017 NCKAP5O14513 1909 aa11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 CHD3Q12873 2000 aaKnown RBP11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 A0A0G2JRQ6 117 aa11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 SLC22A20A6NK97 555 aa11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 RPL36A-HNRNPH2H7BZ11 118 aa11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 DSCR4P56555 118 aaPredicted RBP11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 NKX6-1P78426 367 aaPredicted RBP11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 C4orf17Q53FE4 359 aa11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 OR2T2Q6IF00 324 aa11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 SLC35E3Q7Z769 313 aa11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 THNSL2Q86YJ6 484 aa11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 C17orf78Q8N4C9 275 aa11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 INTS12Q96CB8 462 aaKnown RBP11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 WNT5BQ9H1J7 359 aa11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 TAAR3PQ9P1P4 343 aa11.53□□□□□ -0.56
SNCAIP-209ENST00000508017 IGHV5-10-1A0A0J9YXX1 117 aa11.52□□□□□ -0.56
SNCAIP-209ENST00000508017 LOC102723971A0A1B0GUV8 181 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms