RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
GYPB-208ENST00000507009 PPIL3Q9H2H8 161 aaKnown RBP4.51□□□□□ -1.69
GYPB-208ENST00000507009 MOB1AQ9H8S9 216 aa4.51□□□□□ -1.69
GYPB-208ENST00000507009 ISYNA1Q9NPH2 558 aa4.51□□□□□ -1.69
GYPB-208ENST00000507009 ARL8BQ9NVJ2 186 aa4.51□□□□□ -1.69
GYPB-208ENST00000507009 TAS2R3Q9NYW6 316 aa4.51□□□□□ -1.69
GYPB-208ENST00000507009 ACTR3BQ9P1U1 418 aa4.51□□□□□ -1.69
GYPB-208ENST00000507009 MRM2Q9UI43 246 aaKnown RBP4.51□□□□□ -1.69
GYPB-208ENST00000507009 SNX5Q9Y5X3 404 aa4.51□□□□□ -1.69
GYPB-208ENST00000507009 DNAH7Q8WXX0 4024 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 MEIKINA0A087WXM9 373 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 TRBV2A0A0J9YWF9 115 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 TCRBV5S2A0A599 114 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 TRIM64CA6NLI5 447 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 ZNF729A6NN14 1252 aaPredicted RBP4.5□□□□□ -1.69
GYPB-208ENST00000507009 OOSP1A8MZH6 123 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 J3QR06 171 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 CCRL2O00421 344 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 DEGS1O15121 323 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 FGF16O43320 207 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 RRP9O43818 475 aaKnown RBP4.5□□□□□ -1.69
GYPB-208ENST00000507009 IGHG2P01859 326 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 KRT8P05787 483 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 HCKP08631 526 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 OSMP13725 252 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 ZNF20P17024 532 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 VDAC1P21796 283 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 CD34P28906 385 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 ERP29P30040 261 aaKnown RBP4.5□□□□□ -1.69
GYPB-208ENST00000507009 GPR12P47775 334 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 RBP2P50120 134 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 CDK5Q00535 292 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 MADCAM1Q13477 382 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 ZNF146Q15072 292 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 C17orf58Q2M2W7 97 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 TMEM65Q6PI78 240 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 CD300LDQ6UXZ3 194 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 SSX6Q7RTT6 188 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 HAPLN4Q86UW8 402 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 DHFR2Q86XF0 187 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 CATSPERDQ86XM0 798 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 Q8IYB0 196 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 RDH10Q8IZV5 341 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 OR1N2Q8NGR9 330 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 UBALD1Q8TB05 177 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 FGGYQ96C11 551 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 ISOC1Q96CN7 298 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 CCDC124Q96CT7 223 aaKnown RBP4.5□□□□□ -1.69
GYPB-208ENST00000507009 MISP3Q96FF7 219 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 COQ2Q96H96 371 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 KIRREL1Q96J84 757 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 RHOVQ96L33 236 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 LRGUKQ96M69 825 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 RASL11BQ9BPW5 248 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 MAGIXQ9H6Y5 334 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 HMG20AQ9NP66 347 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 PCDHB16Q9NRJ7 776 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 CALYQ9NYX4 217 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 H2AFY2Q9P0M6 372 aaPredicted RBP4.5□□□□□ -1.69
GYPB-208ENST00000507009 DNAJB9Q9UBS3 223 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 TAGLN3Q9UI15 199 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 PSG11Q9UQ72 335 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 MYRFQ9Y2G1 1151 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 HYDINQ4G0P3 5121 aa4.5□□□□□ -1.69
GYPB-208ENST00000507009 HUWE1Q7Z6Z7 4374 aaKnown RBP4.49□□□□□ -1.69
GYPB-208ENST00000507009 LYSTQ99698 3801 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 IGKV1-12A0A0C4DH73 117 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 KBTBD11-OT1A0A1B0GTJ5 212 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 LOC107986453A0A1B0GWG9 222 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 FAM90A18PA6NE21 464 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 FAM90A16PA6NEW6 464 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 FAM90A20PA6NIJ5 464 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 FAM90A9PA6NNJ1 464 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 FAM90A12PA8MX19 464 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 FAM90A5PA8MXJ8 464 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 OVOL1O14753 267 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 HSD17B6O14756 317 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 PRKYO43930 277 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 JTBO76095 146 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 IGKV1D-12P01611 117 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 OR8U8P0C7N1 319 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 FAM90A15PP0C7V4 464 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 FAM90A13PP0C7W8 464 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 FAM90A14PP0C7W9 464 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 FAM90A24PP0C7X0 464 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 TMEM225BP0DP42 221 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 SLC2A2P11168 524 aaPredicted RBP4.49□□□□□ -1.69
GYPB-208ENST00000507009 GP9P14770 177 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 MYF6P23409 242 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 SSTR5P35346 364 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 CDX1P47902 265 aaPredicted RBP4.49□□□□□ -1.69
GYPB-208ENST00000507009 RAB7AP51149 207 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 SLURP1P55000 103 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 CDC42P60953 191 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 GNB1P62873 340 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 ID3Q02535 119 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 PDZK1IP1Q13113 114 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 FOXE3Q13461 319 aa4.49□□□□□ -1.69
GYPB-208ENST00000507009 PAN3Q58A45 887 aaKnown RBP4.49□□□□□ -1.69
GYPB-208ENST00000507009 SPIN3Q5JUX0 258 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms