RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 NCOR1P1Q9H4R4 102 aa16.27■□□□□ 0.2
SNX25-204ENST00000506896 HEXA-AS1Q9H8Q6 139 aa16.27■□□□□ 0.2
SNX25-204ENST00000506896 STUB1Q9UNE7 303 aa16.27■□□□□ 0.2
SNX25-204ENST00000506896 UBE2J1Q9Y385 318 aaPredicted RBP16.27■□□□□ 0.2
SNX25-204ENST00000506896 DSCAML1Q8TD84 2053 aa16.26■□□□□ 0.19
SNX25-204ENST00000506896 RNASEK-C17orf49H0YIS7 233 aa16.26■□□□□ 0.19
SNX25-204ENST00000506896 FGF9P31371 208 aaPredicted RBP16.26■□□□□ 0.19
SNX25-204ENST00000506896 UBE2E1P51965 193 aa16.26■□□□□ 0.19
SNX25-204ENST00000506896 DLX6P56179 175 aa16.26■□□□□ 0.19
SNX25-204ENST00000506896 ATXN7L3Q14CW9 347 aaPredicted RBP16.26■□□□□ 0.19
SNX25-204ENST00000506896 TAF9Q16594 264 aa16.26■□□□□ 0.19
SNX25-204ENST00000506896 TRAPPC6BQ86SZ2 158 aa16.26■□□□□ 0.19
SNX25-204ENST00000506896 C11orf42Q8N5U0 333 aa16.26■□□□□ 0.19
SNX25-204ENST00000506896 TPRX1Q8N7U7 411 aa16.26■□□□□ 0.19
SNX25-204ENST00000506896 DPCDQ9BVM2 203 aaPredicted RBP16.26■□□□□ 0.19
SNX25-204ENST00000506896 GAL3ST2Q9H3Q3 398 aa16.26■□□□□ 0.19
SNX25-204ENST00000506896 PLGRKTQ9HBL7 147 aa16.26■□□□□ 0.19
SNX25-204ENST00000506896 OR6C3Q9NZP0 311 aa16.26■□□□□ 0.19
SNX25-204ENST00000506896 AK6Q9Y3D8 172 aaKnown RBP16.26■□□□□ 0.19
SNX25-204ENST00000506896 ODAMA1E959 279 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 SLC17A2O00624 439 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 HSPB6O14558 160 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 BPNT1O95861 308 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 GLIPR1P48060 266 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 RUSC1-AS1Q66K80 236 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 TCF23Q7RTU1 214 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 SIGLECL1Q8N7X8 197 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 SUMF2Q8NBJ7 301 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 TMEM104Q8NE00 496 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 KCNG3Q8TAE7 436 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 CORO2AQ92828 525 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 COQ2Q96H96 371 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 SELENOIQ9C0D9 397 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 PRDM13Q9H4Q3 707 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 BANF2Q9H503 90 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 TAS2R3Q9NYW6 316 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 SSR3Q9UNL2 185 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 V9GY05 133 aa16.25■□□□□ 0.19
SNX25-204ENST00000506896 RBM39Q14498 530 aaKnown RBP16.24■□□□□ 0.19
SNX25-204ENST00000506896 RAB11BQ15907 218 aa16.24■□□□□ 0.19
SNX25-204ENST00000506896 ATAD3CQ5T2N8 411 aa16.24■□□□□ 0.19
SNX25-204ENST00000506896 C22orf42Q6IC83 251 aa16.24■□□□□ 0.19
SNX25-204ENST00000506896 PDZD9Q8IXQ8 264 aa16.24■□□□□ 0.19
SNX25-204ENST00000506896 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.24■□□□□ 0.19
SNX25-204ENST00000506896 ZDHHC22Q8N966 263 aa16.24■□□□□ 0.19
SNX25-204ENST00000506896 Q96M66 194 aa16.24■□□□□ 0.19
SNX25-204ENST00000506896 GFI1Q99684 422 aa16.24■□□□□ 0.19
SNX25-204ENST00000506896 ESM1Q9NQ30 184 aa16.24■□□□□ 0.19
SNX25-204ENST00000506896 RCC2Q9P258 522 aaKnown RBP16.24■□□□□ 0.19
SNX25-204ENST00000506896 TENM1Q9UKZ4 2725 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 NPFFO15130 113 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 GLAP06280 429 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 IGHV1-8P0DP01 117 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 VSIG8P0DPA2 414 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 ARSBP15848 533 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 KLRD1Q13241 179 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 MIDNQ504T8 468 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 ZNF565Q8N9K5 539 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 FAM46BQ96A09 425 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 SLC25A28Q96A46 364 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 ZNF48Q96MX3 618 aaPredicted RBP16.23■□□□□ 0.19
SNX25-204ENST00000506896 TMEM59Q9BXS4 323 aa16.23■□□□□ 0.19
SNX25-204ENST00000506896 ZMAT3Q9HA38 289 aaKnown RBP16.23■□□□□ 0.19
SNX25-204ENST00000506896 TXNL4BQ9NX01 149 aaKnown RBP16.23■□□□□ 0.19
SNX25-204ENST00000506896 MEIKINA0A087WXM9 373 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 MCRIP1C9JLW8 97 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 CLPXO76031 633 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 MPIG6BO95866 241 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 CD36P16671 472 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 CFPP27918 469 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 DLX1P56177 255 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 RPS27AP62979 156 aaKnown RBP16.22■□□□□ 0.19
SNX25-204ENST00000506896 DEFB112Q30KQ8 113 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 RSBN1Q5VWQ0 802 aaPredicted RBP16.22■□□□□ 0.19
SNX25-204ENST00000506896 SLC35E4Q6ICL7 350 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 HCP5Q6MZN7 132 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 OR2W3Q7Z3T1 314 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 PIP4P2Q8N4L2 257 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 OR13D1Q8NGV5 346 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 FAM216AQ8WUB2 273 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 ZDHHC16Q969W1 377 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 KIF25Q9UIL4 384 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 FAM96BQ9Y3D0 163 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 SESN1Q9Y6P5 492 aa16.22■□□□□ 0.19
SNX25-204ENST00000506896 MEX3AA1L020 520 aaKnown RBP16.21■□□□□ 0.19
SNX25-204ENST00000506896 ZNF729A6NN14 1252 aaPredicted RBP16.21■□□□□ 0.19
SNX25-204ENST00000506896 TMEM14DPA8MWL7 114 aa16.21■□□□□ 0.19
SNX25-204ENST00000506896 TRIM77I1YAP6 450 aa16.21■□□□□ 0.19
SNX25-204ENST00000506896 RAB3BP20337 219 aa16.21■□□□□ 0.19
SNX25-204ENST00000506896 FUT3P21217 361 aa16.21■□□□□ 0.19
SNX25-204ENST00000506896 BAMBIQ13145 260 aa16.21■□□□□ 0.19
SNX25-204ENST00000506896 TIMM50Q3ZCQ8 353 aa16.21■□□□□ 0.19
SNX25-204ENST00000506896 OR52W1Q6IF63 320 aa16.21■□□□□ 0.19
SNX25-204ENST00000506896 RAB12Q6IQ22 244 aa16.21■□□□□ 0.19
SNX25-204ENST00000506896 ZNF782Q6ZMW2 699 aaPredicted RBP16.21■□□□□ 0.19
SNX25-204ENST00000506896 TPRA1Q86W33 373 aa16.21■□□□□ 0.19
SNX25-204ENST00000506896 NEK7Q8TDX7 302 aa16.21■□□□□ 0.19
SNX25-204ENST00000506896 URM1Q9BTM9 101 aaKnown RBP16.21■□□□□ 0.19
SNX25-204ENST00000506896 TM2D1Q9BX74 207 aa16.21■□□□□ 0.19
SNX25-204ENST00000506896 ING3Q9NXR8 418 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms