RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 TRGV10A0A0A0MS01 117 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 TRAV24A0A0B4J272 114 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 GEMIN2O14893 280 aaKnown RBP10.69□□□□□ -0.7
TCOF1-209ENST00000506630 MRPS14O60783 128 aaKnown RBP10.69□□□□□ -0.7
TCOF1-209ENST00000506630 PAHP00439 452 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 CSN2P05814 226 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 MELTFP08582 738 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 UCHL1P09936 223 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 IGHV1-8P0DP01 117 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 GTF2F2P13984 249 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 SRMP19623 302 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 GABRA5P31644 462 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 SAA4P35542 130 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 GLIPR1P48060 266 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 EMX1Q04741 257 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-209ENST00000506630 NHLRC3Q5JS37 347 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 GLT8D1Q68CQ7 371 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 LINC00596Q86U02 117 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 LRRTM1Q86UE6 522 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 CDH26Q8IXH8 852 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 C11orf42Q8N5U0 333 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 PHYHIPQ92561 330 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 COQ2Q96H96 371 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 UQCC2Q9BRT2 126 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 YTHDF1Q9BYJ9 559 aaKnown RBP10.69□□□□□ -0.7
TCOF1-209ENST00000506630 PPIL3Q9H2H8 161 aaKnown RBP10.69□□□□□ -0.7
TCOF1-209ENST00000506630 PRDM13Q9H4Q3 707 aa10.69□□□□□ -0.7
TCOF1-209ENST00000506630 UBE2J1Q9Y385 318 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-209ENST00000506630 ODAMA1E959 279 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 CRTAPO75718 401 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-209ENST00000506630 CLPXO76031 633 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 RBP4P02753 201 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 RNASE1P07998 156 aaKnown RBP10.68□□□□□ -0.7
TCOF1-209ENST00000506630 GLP1RP43220 463 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 FABP5Q01469 135 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 MPV17LQ2QL34 196 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 ATAD3CQ5T2N8 411 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 TMEM91Q6ZNR0 172 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 LYPD6Q86Y78 171 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 LDLRAD3Q86YD5 345 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 SUMF2Q8NBJ7 301 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 OR13D1Q8NGV5 346 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 FOXRED1Q96CU9 486 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-209ENST00000506630 DPCDQ9BVM2 203 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-209ENST00000506630 GAL3ST2Q9H3Q3 398 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 BANF2Q9H503 90 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 ZNF581Q9P0T4 197 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 ZNRD1Q9P1U0 126 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 SESN1Q9Y6P5 492 aa10.68□□□□□ -0.7
TCOF1-209ENST00000506630 CLDN34H7C241 214 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 ARL6IP5O75915 188 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 ARG1P05089 322 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 MGMTP16455 207 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 CALRP27797 417 aaKnown RBP10.67□□□□□ -0.7
TCOF1-209ENST00000506630 PSMB9P28065 219 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 KCNJ3P48549 501 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 LGALS4P56470 323 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 SSX1Q16384 188 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 TAF9Q16594 264 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 PRAMEF5Q5TYX0 476 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 SPARTQ8N0X7 666 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 PLPPR1Q8TBJ4 325 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 NEK7Q8TDX7 302 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 SSMEM1Q8WWF3 244 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 FAM46BQ96A09 425 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 BARHL1Q9BZE3 327 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 SELENOIQ9C0D9 397 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 KIF25Q9UIL4 384 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 LRRC42Q9Y546 428 aa10.67□□□□□ -0.7
TCOF1-209ENST00000506630 MEIKINA0A087WXM9 373 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 BTBD17A6NE02 478 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 MPIG6BO95866 241 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 IGHV4-59P01825 116 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 DYNC1I2Q13409 638 aaKnown RBP10.66□□□□□ -0.7
TCOF1-209ENST00000506630 UBE2UQ5VVX9 321 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 RSBN1Q5VWQ0 802 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-209ENST00000506630 C16orf87Q6PH81 154 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 ZNF773Q6PK81 442 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 BRICD5Q6PL45 260 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 TMEM86BQ8N661 226 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 TMEM104Q8NE00 496 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 C17orf50Q8WW18 174 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 FCGR1BQ92637 280 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 MRPS24Q96EL2 167 aaKnown RBP10.66□□□□□ -0.7
TCOF1-209ENST00000506630 CHIAQ9BZP6 476 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 CST11Q9H112 138 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 KCNK15Q9H427 330 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 IFT22Q9H7X7 185 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 PLGRKTQ9HBL7 147 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 NDUFB11Q9NX14 153 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 TAS2R3Q9NYW6 316 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 OR6C3Q9NZP0 311 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 GHRLQ9UBU3 117 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 AK6Q9Y3D8 172 aaKnown RBP10.66□□□□□ -0.7
TCOF1-209ENST00000506630 POMT1Q9Y6A1 747 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 CMYA5Q8N3K9 4069 aa10.66□□□□□ -0.7
TCOF1-209ENST00000506630 FAM172BPA6NC97 362 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 ZNF729A6NN14 1252 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-209ENST00000506630 CCRL2O00421 344 aa10.65□□□□□ -0.7
TCOF1-209ENST00000506630 RRP9O43818 475 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms