RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 WISP1O95388 367 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 CST2P09228 141 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 FGF5P12034 268 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 CTSEP14091 401 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 ZNF25P17030 456 aaPredicted RBP13.77□□□□□ -0.21
SCLT1-208ENST00000506368 NPBWR2P48146 333 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 SERF2P84101 59 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 MPV17LQ2QL34 196 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 ZNF66Q6ZN08 573 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 ZNF573Q86YE8 665 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 OR1N1Q8NGS0 311 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 PINX1Q96BK5 328 aaKnown RBP13.77□□□□□ -0.21
SCLT1-208ENST00000506368 GLRX2Q9NS18 164 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 B3GALT1Q9Y5Z6 326 aa13.77□□□□□ -0.21
SCLT1-208ENST00000506368 ADAMTS9Q9P2N4 1935 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 SSSCA1O60232 199 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 VDAC1P21796 283 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 OR10J1P30954 320 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 APLNRP35414 380 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 TMEM211Q6ICI0 200 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 ASCL4Q6XD76 172 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 WDFY1Q8IWB7 410 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 OR51G1Q8NGK1 321 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 B3GAT1Q9P2W7 334 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 MRPS17Q9Y2R5 130 aaKnown RBP13.76□□□□□ -0.21
SCLT1-208ENST00000506368 PHF3Q92576 2039 aaKnown RBP13.76□□□□□ -0.21
SCLT1-208ENST00000506368 SLC25A6P12236 298 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 COL9A1P20849 921 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 SRP14P37108 136 aaKnown RBP13.76□□□□□ -0.21
SCLT1-208ENST00000506368 ASCL1P50553 236 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 NUBP1P53384 320 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 CLN3Q13286 438 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 SRSF7Q16629 238 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCLT1-208ENST00000506368 ACTL10Q5JWF8 245 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 TSPO2Q5TGU0 170 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 WDR25Q64LD2 544 aaPredicted RBP13.76□□□□□ -0.21
SCLT1-208ENST00000506368 MRPL41Q8IXM3 137 aaKnown RBP13.76□□□□□ -0.21
SCLT1-208ENST00000506368 TP53RKQ96S44 253 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 HDHD3Q9BSH5 251 aaPredicted RBP13.76□□□□□ -0.21
SCLT1-208ENST00000506368 FAAP24Q9BTP7 215 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 GPR173Q9NS66 373 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 GAB2Q9UQC2 676 aa13.76□□□□□ -0.21
SCLT1-208ENST00000506368 UBE2J1Q9Y385 318 aaPredicted RBP13.76□□□□□ -0.21
SCLT1-208ENST00000506368 B4E171 279 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 HRASP01112 189 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 TSPAN7P41732 249 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 RANP62826 216 aaKnown RBP13.75□□□□□ -0.21
SCLT1-208ENST00000506368 LCN2P80188 198 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 HERPUD1Q15011 391 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 CNN3Q15417 329 aaKnown RBP13.75□□□□□ -0.21
SCLT1-208ENST00000506368 HIST3H3Q16695 136 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 TMEM241Q24JQ0 296 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 TMEM92Q6UXU6 159 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 MEX3BQ6ZN04 569 aaKnown RBP13.75□□□□□ -0.21
SCLT1-208ENST00000506368 Q6ZS49 121 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 P4HA3Q7Z4N8 544 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 EMC6Q9BV81 110 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 PARD6GQ9BYG4 376 aaPredicted RBP13.75□□□□□ -0.21
SCLT1-208ENST00000506368 ZNF160Q9HCG1 818 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 TMEM250H0YL14 139 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 H7BYZ3 331 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 RER1O15258 196 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 TLX3O43711 291 aaPredicted RBP13.75□□□□□ -0.21
SCLT1-208ENST00000506368 OMGP23515 440 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 G0S2P27469 103 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 MSX1P28360 303 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 IDH3GP51553 393 aaPredicted RBP13.75□□□□□ -0.21
SCLT1-208ENST00000506368 SLC25A53Q5H9E4 307 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 ZNF880Q6PDB4 577 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 SELENOHQ8IZQ5 122 aaKnown RBP13.75□□□□□ -0.21
SCLT1-208ENST00000506368 TMEM105Q8N8V8 129 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 GJC3Q8NFK1 279 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 SCGB1C1Q8TD33 95 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 LYZL4Q96KX0 146 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 MRGPRX4Q96LA9 322 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 IL36GQ9NZH8 169 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 PRSS50Q9UI38 385 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 LAMP3Q9UQV4 416 aa13.75□□□□□ -0.21
SCLT1-208ENST00000506368 FRYLO94915 3013 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 ZFP92A6NM28 416 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 C17orf51A8MQB3 221 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 KBTBD11O94819 623 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 PPYP01298 95 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 GUCA1AP43080 201 aaPredicted RBP13.74□□□□□ -0.21
SCLT1-208ENST00000506368 GALR1P47211 349 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 RNPS1Q15287 305 aaKnown RBP13.74□□□□□ -0.21
SCLT1-208ENST00000506368 NMSQ5H8A3 153 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 SLC25A24Q6NUK1 477 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 TMEM123Q8N131 208 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 CLDN23Q96B33 292 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 CYYR1Q96J86 154 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 RAB40CQ96S21 281 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 ATG101Q9BSB4 218 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 TMEM208Q9BTX3 173 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 FKBP11Q9NYL4 201 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 PIGLQ9Y2B2 252 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 ALPK2Q86TB3 2170 aa13.74□□□□□ -0.21
SCLT1-208ENST00000506368 LOC102725191A0A1B0GVB3 256 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 A0A1W2PQF6 199 aa13.73□□□□□ -0.21
SCLT1-208ENST00000506368 TP53I11O14683 189 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms