RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 SMIM21Q3B7S5 101 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 PAN3Q58A45 887 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 RNASE10Q5GAN6 216 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 AADACL3Q5VUY0 350 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 RSBN1Q5VWQ0 802 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 TEX36Q5VZQ5 186 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 STUMQ69YW2 141 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 ZNF660Q6AZW8 331 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 PLET1Q6UQ28 207 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 ZNF782Q6ZMW2 699 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 MEX3BQ6ZN04 569 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 ZNF497Q6ZNH5 498 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 IDO2Q6ZQW0 420 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 Q6ZS49 121 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 OVCH2Q7RTZ1 564 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 DTX2Q86UW9 622 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 LHFPL1Q86WI0 220 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 FAM90A1Q86YD7 464 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 BOLLQ8N9W6 283 aaKnown RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 ANGPTL6Q8NI99 470 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 ERGIC1Q969X5 290 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 CHST6Q9GZX3 395 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 SHARPINQ9H0F6 387 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 PPA2Q9H2U2 334 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 SAP30LQ9HAJ7 183 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 SEBOXQ9HB31 216 aaPredicted RBP5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 SPACA1Q9HBV2 294 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 TMEM165Q9HC07 324 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 DYNLRB1Q9NP97 96 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 ETAA1Q9NY74 926 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 RNF7Q9UBF6 113 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 ANXA10Q9UJ72 324 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 PPP1R3CQ9UQK1 317 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 VSIG4Q9Y279 399 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 WIPI2Q9Y4P8 454 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 MAB21L2Q9Y586 359 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 NUBP2Q9Y5Y2 271 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 NPTNQ9Y639 398 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 LRBAP50851 2863 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 MYO18BQ8IUG5 2567 aa5.77□□□□□ -1.49
TOPBP1-203ENST00000503464 C7orf66A4D0T2 115 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 INMT-MINDY4F8WBC2 141 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 LYNX1G3V0Z9 82 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 TMEM178BH3BS89 294 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 IFNL4K9M1U5 179 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 SH2D1BO14796 132 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 TNFRSF13BO14836 293 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 RP2O75695 350 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 CLDN1O95832 211 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 SCTP09683 121 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 H2AFB2P0C5Z0 115 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 GSTT2P0CG29 244 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 LYNX1P0DP58 116 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 RCC1P18754 421 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 TNFRSF1AP19438 455 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 ANXA7P20073 488 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 TNFSF4P23510 183 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 PRDX2P32119 198 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 FAUP35544 74 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 SNRPD2P62316 118 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 BTG1P62324 171 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 MEF2DQ14814 521 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 SRSF7Q16629 238 aaKnown RBP eCLIP5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 ACTBL2Q562R1 376 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 IGSF11Q5DX21 431 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 ATPAF1Q5TC12 328 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 SLC36A1Q7Z2H8 476 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 LDLRAD3Q86YD5 345 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 FGFRL1Q8N441 504 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 OR5AP2Q8NGF4 316 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 OR5H2Q8NGV7 314 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 CHAC2Q8WUX2 184 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 IGFBPL1Q8WX77 278 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 GAFA1Q96PS6 74 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 GINS4Q9BRT9 223 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 TRAF4Q9BUZ4 470 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 BEX2Q9BXY8 128 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 GHITMQ9H3K2 345 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 MS4A5Q9H3V2 200 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 BEX1Q9HBH7 125 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 CBLN4Q9NTU7 201 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 MBNL3Q9NUK0 354 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 ING3Q9NXR8 418 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 COPZ2Q9P299 210 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 EDARQ9UNE0 448 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 KLF2Q9Y5W3 355 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 ALG5Q9Y673 324 aa5.76□□□□□ -1.49
TOPBP1-203ENST00000503464 COL12A1Q99715 3063 aa5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 A0A0A6YYJ9 748 aa5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 OOEPA6NGQ2 149 aa5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 OR5H14A6NHG9 310 aa5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 CEACAM18A8MTB9 384 aa5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 VSTM5A8MXK1 200 aa5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 PEX14O75381 377 aa5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 LY6HO94772 140 aa5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 GYPAP02724 150 aa5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 COL8A2P25067 703 aa5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 MDH2P40926 338 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 GLIPR1P48060 266 aa5.75□□□□□ -1.49
TOPBP1-203ENST00000503464 RAG2P55895 527 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms