RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 RPS27AP62979 156 aaKnown RBP13.53□□□□□ -0.24
SCLT1-205ENST00000503401 KLRD1Q13241 179 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 BRD3OSQ6XYD6 125 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 TRAPPC6BQ86SZ2 158 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 TPRA1Q86W33 373 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 KIR3DL3Q8N743 410 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 NAA50Q9GZZ1 169 aaKnown RBP13.53□□□□□ -0.24
SCLT1-205ENST00000503401 LIN7BQ9HAP6 207 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 SOX21Q9Y651 276 aaPredicted RBP13.53□□□□□ -0.24
SCLT1-205ENST00000503401 A0A0A6YYD4 124 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 hADV38S2A0JD32 116 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 ODAMA1E959 279 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 NOTOA8MTQ0 251 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 EPHA1P21709 976 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 ERP29P30040 261 aaKnown RBP13.53□□□□□ -0.24
SCLT1-205ENST00000503401 ALDH3B2P48448 385 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 DLX6P56179 175 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 RUSC1-AS1Q66K80 236 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 RAB12Q6IQ22 244 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 GDPGP1Q6ZNW5 385 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 RTN4RL2Q86UN3 420 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 C11orf42Q8N5U0 333 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 NEK7Q8TDX7 302 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 DYRK2Q92630 601 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 DMRTB1Q96MA1 342 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 RCC2Q9P258 522 aaKnown RBP13.53□□□□□ -0.24
SCLT1-205ENST00000503401 DAPK2Q9UIK4 370 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 SCOCQ9UIL1 159 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 PEX16Q9Y5Y5 336 aa13.53□□□□□ -0.24
SCLT1-205ENST00000503401 TRAV39A0A0B4J263 110 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 CENPVL3A0A0U1RRI6 287 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 M0R1W7 72 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 NCS1P62166 190 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 MEF2CQ06413 473 aaPredicted RBP13.52□□□□□ -0.25
SCLT1-205ENST00000503401 NKAPLQ5M9Q1 402 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 RSBN1Q5VWQ0 802 aaPredicted RBP13.52□□□□□ -0.25
SCLT1-205ENST00000503401 SFXN4Q6P4A7 337 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 ZNF782Q6ZMW2 699 aaPredicted RBP13.52□□□□□ -0.25
SCLT1-205ENST00000503401 OR2W3Q7Z3T1 314 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 BCL6BQ8N143 479 aaPredicted RBP13.52□□□□□ -0.25
SCLT1-205ENST00000503401 TEX29Q8N6K0 151 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 POM121Q96HA1 1249 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 ZNF714Q96N38 554 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 LPAR5Q9H1C0 372 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 ZNF69Q9UC07 566 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 KIF25Q9UIL4 384 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 NUP50Q9UKX7 468 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 LINC00312Q9Y6C7 94 aa13.52□□□□□ -0.25
SCLT1-205ENST00000503401 MEIKINA0A087WXM9 373 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 A0A1W2PPH5 198 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 A0A1W2PRD5 423 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 A0A1W2PRF3 423 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 A0A1W2PRM7 423 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A10PA6NDY2 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A18PA6NE21 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A16PA6NEW6 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A20PA6NIJ5 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A8PA6NJQ4 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A7PA6NKC0 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A22PA8MWA6 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A12PA8MX19 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A5PA8MXJ8 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A23PA8MXZ1 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 LDLRAD4O15165 306 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A15PP0C7V4 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A13PP0C7W8 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A14PP0C7W9 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 FAM90A24PP0C7X0 464 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 ZNF728P0DKX0 622 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 CFPP27918 469 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 EFNB2P52799 333 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 VBP1P61758 197 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 GPR157Q5UAW9 335 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 GPR107Q5VW38 600 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 SLC16A12Q6ZSM3 486 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 GPR141Q7Z602 305 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 TM2D1Q9BX74 207 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 BARHL1Q9BZE3 327 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 METTL8Q9H825 291 aaKnown RBP13.51□□□□□ -0.25
SCLT1-205ENST00000503401 SPACA1Q9HBV2 294 aa13.51□□□□□ -0.25
SCLT1-205ENST00000503401 TRGV10A0A0A0MS01 117 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 UBE2QL1A1L167 161 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 FUOMA2VDF0 154 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 MCRIP1C9JLW8 97 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 RNASEK-C17orf49H0YIS7 233 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 SOCS1O15524 211 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 FUT3P21217 361 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 GLP1RP43220 463 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 PNKDQ8N490 385 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 OR13A1Q8NGR1 328 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 TNFRSF14Q92956 283 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 C17orf98A8MV24 154 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 PDCD6O75340 191 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 PAHP00439 452 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 SNRPBP14678 240 aaKnown RBP13.5□□□□□ -0.25
SCLT1-205ENST00000503401 PRTN3P24158 256 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 CHATP28329 748 aa13.5□□□□□ -0.25
SCLT1-205ENST00000503401 BLVRBP30043 206 aaPredicted RBP13.5□□□□□ -0.25
SCLT1-205ENST00000503401 RPS19P39019 145 aaKnown RBP13.5□□□□□ -0.25
SCLT1-205ENST00000503401 KCNJ3P48549 501 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms