RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 IGHV4-61A0A0C4DH41 118 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 SERPINE3A8MV23 424 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 MGST3O14880 152 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 MELTFP08582 738 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 SLC25A16P16260 332 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 AESQ08117 197 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 HACD4Q5VWC8 232 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 SHEQ5VZ18 495 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 PLPPR1Q8TBJ4 325 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 ETAA1Q9NY74 926 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 NOTCH2Q04721 2471 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 TPPPO94811 219 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 NDUFB7P17568 137 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 KCNJ3P48549 501 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 SEC61A1P61619 476 aaKnown RBP16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 LMO4P61968 165 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 ARFRP1Q13795 201 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 PYHIN1Q6K0P9 492 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 BAIAP2L2Q6UXY1 529 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 GDPD3Q7L5L3 318 aa16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 GCDHQ92947 438 aaPredicted RBP16.94■□□□□ 0.3
CDC42SE2-206ENST00000503291 PRRC2AP48634 2157 aaKnown RBP16.93■□□□□ 0.3
CDC42SE2-206ENST00000503291 F5H0A9 414 aaPredicted RBP16.93■□□□□ 0.3
CDC42SE2-206ENST00000503291 IGHV2-5P01817 119 aa16.93■□□□□ 0.3
CDC42SE2-206ENST00000503291 LSAMPQ13449 338 aa16.93■□□□□ 0.3
CDC42SE2-206ENST00000503291 EDDM3AQ14507 147 aa16.93■□□□□ 0.3
CDC42SE2-206ENST00000503291 PNLIPRP3Q17RR3 467 aa16.93■□□□□ 0.3
CDC42SE2-206ENST00000503291 COQ2Q96H96 371 aa16.93■□□□□ 0.3
CDC42SE2-206ENST00000503291 HDHD3Q9BSH5 251 aaPredicted RBP16.93■□□□□ 0.3
CDC42SE2-206ENST00000503291 AKIP1Q9NQ31 210 aa16.93■□□□□ 0.3
CDC42SE2-206ENST00000503291 PITPNAQ00169 270 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 ZNF45Q02386 682 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 ZNF79Q15937 498 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 TPRX1Q8N7U7 411 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 C15orf40Q8WUR7 153 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 Q96MF0 132 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 CMSS1Q9BQ75 279 aaKnown RBP16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 RABL2AQ9UBK7 228 aaPredicted RBP16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 CLN8Q9UBY8 286 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 RABL2BQ9UNT1 228 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 DOCK11Q5JSL3 2073 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 PRSS3P35030 304 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 EDDM3BP56851 147 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 GNG2P59768 71 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 KRBOX4Q5JUW0 171 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 RSBN1Q5VWQ0 802 aaPredicted RBP16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 WDR25Q64LD2 544 aaPredicted RBP16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 ZNF497Q6ZNH5 498 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 MFSD4AQ8N468 514 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 NUDCD2Q8WVJ2 157 aa16.92■□□□□ 0.3
CDC42SE2-206ENST00000503291 MEIOCA2RUB1 952 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 CD3GP09693 182 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 USF1P22415 310 aaPredicted RBP16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 GLIPR1P48060 266 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 GUCA2AQ02747 115 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 MALRD1Q5VYJ5 2156 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 S100ZQ8WXG8 99 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 PHF1O43189 567 aaPredicted RBP16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 CA11O75493 328 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 MT-ND4P03905 459 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 PTBP1P26599 531 aaKnown RBP eCLIP16.91■□□□□ 0.31e-7■■■■□ 24.1
CDC42SE2-206ENST00000503291 IL2RGP31785 369 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 NPY4RP50391 375 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 GNB2P62879 340 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 MRPS15P82914 257 aaKnown RBP16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 PAX5Q02548 391 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 ESCO2Q56NI9 601 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 SLC35E4Q6ICL7 350 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 WFDC11Q8NEX6 87 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 RAB39BQ96DA2 213 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 KIF25Q9UIL4 384 aa16.91■□□□□ 0.3
CDC42SE2-206ENST00000503291 SSX5O60225 188 aa16.9■□□□□ 0.3
CDC42SE2-206ENST00000503291 NAPSAO96009 420 aa16.9■□□□□ 0.3
CDC42SE2-206ENST00000503291 INHBBP09529 407 aa16.9■□□□□ 0.3
CDC42SE2-206ENST00000503291 ERP29P30040 261 aaKnown RBP16.9■□□□□ 0.3
CDC42SE2-206ENST00000503291 P2RX3P56373 397 aa16.9■□□□□ 0.3
CDC42SE2-206ENST00000503291 PYDC2Q56P42 97 aa16.9■□□□□ 0.3
CDC42SE2-206ENST00000503291 GAPTQ8N292 157 aa16.9■□□□□ 0.3
CDC42SE2-206ENST00000503291 OR4K15Q8NH41 348 aa16.9■□□□□ 0.3
CDC42SE2-206ENST00000503291 H1FXQ92522 213 aaKnown RBP16.9■□□□□ 0.3
CDC42SE2-206ENST00000503291 SSBP3Q9BWW4 388 aaPredicted RBP16.9■□□□□ 0.3
CDC42SE2-206ENST00000503291 C12orf4Q9NQ89 552 aa16.9■□□□□ 0.3
CDC42SE2-206ENST00000503291 A0A096LNT2 108 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 TMEM30CPA0ZSE6 113 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 GPR37O15354 613 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 TSC22D3Q99576 134 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 REG4Q9BYZ8 158 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 RIMS4Q9H426 269 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 CHMP1AQ9HD42 196 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 ITGB1BP2Q9UKP3 347 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 MED13LQ71F56 2210 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 MEIKINA0A087WXM9 373 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 FUOMA2VDF0 154 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 RNF223E7ERA6 249 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 CTDSPLO15194 276 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 RNASE12Q5GAN4 147 aaKnown RBP16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 BTN2A1Q7KYR7 527 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 OR52I2Q8NH67 350 aa16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 MRPL30Q8TCC3 161 aaKnown RBP16.89■□□□□ 0.29
CDC42SE2-206ENST00000503291 CCDC107Q8WV48 283 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms