RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 IGLV1-47P01700 117 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 PRB2P02812 416 aaPredicted RBP13.02□□□□□ -0.33
SCLT1-204ENST00000503215 OPN1MWP04001 364 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 OPN1MW2P0DN77 364 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 OPN1MW3P0DN78 364 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 RANBP1P43487 201 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 SATL1Q86VE3 508 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 CROCCP3Q8IVE0 287 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 ORAI1Q96D31 301 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 FGF20Q9NP95 211 aaPredicted RBP13.02□□□□□ -0.33
SCLT1-204ENST00000503215 TAS2R3Q9NYW6 316 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 PITPNC1Q9UKF7 332 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 RAB26Q9ULW5 256 aa13.02□□□□□ -0.33
SCLT1-204ENST00000503215 TRAV39A0A0B4J263 110 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 SH2D7A6NKC9 451 aaPredicted RBP13.01□□□□□ -0.33
SCLT1-204ENST00000503215 H0YJX3 145 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 IGHV3-7P01780 117 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 CSN2P05814 226 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 CCDC159P0C7I6 412 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 CGB3P0DN86 165 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 CGB7P0DN87 165 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 BDH1Q02338 343 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 PIGYQ3MUY2 71 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 CNIH3Q8TBE1 160 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 TNFAIP8L1Q8WVP5 186 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 OCSTAMPQ9BR26 566 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 JAM3Q9BX67 310 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 MRPS26Q9BYN8 205 aaKnown RBP13.01□□□□□ -0.33
SCLT1-204ENST00000503215 MMP28Q9H239 520 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 GAL3ST2Q9H3Q3 398 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 CLEC2DQ9UHP7 191 aa13.01□□□□□ -0.33
SCLT1-204ENST00000503215 LY6LH3BQJ8 138 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 CDRT1O95170 752 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 LALBAP00709 142 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 RAB3AP20336 220 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 CD34P28906 385 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 PTGFRP43088 359 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 MTNR1BP49286 362 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 BEAN1Q3B7T3 259 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 KLHL22Q53GT1 634 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 ELP2Q6IA86 826 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 CHST4Q8NCG5 386 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 PXT1Q8NFP0 134 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 OR51T1Q8NGJ9 327 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 OR13A1Q8NGR1 328 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 OR13C5Q8NGS8 318 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 LEAP2Q969E1 77 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 RHOFQ9HBH0 211 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 KIF25Q9UIL4 384 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 PCDHGB5Q9Y5G0 923 aa13□□□□□ -0.33
SCLT1-204ENST00000503215 FUOMA2VDF0 154 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 AMY1AP04745 511 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 AMY2AP04746 511 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 NFYBP25208 207 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 OR3A4PP47883 348 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 MRPL28Q13084 256 aaKnown RBP12.99□□□□□ -0.33
SCLT1-204ENST00000503215 LRRC36Q1X8D7 754 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 PAN3Q58A45 887 aaKnown RBP12.99□□□□□ -0.33
SCLT1-204ENST00000503215 TPTE2P1Q5T6R2 138 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 SAMD5Q5TGI4 173 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 OR52W1Q6IF63 320 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 RTN4RL2Q86UN3 420 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 PLPPR1Q8TBJ4 325 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 ZNF596Q8TC21 504 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 GPER1Q99527 375 aa12.99□□□□□ -0.33
SCLT1-204ENST00000503215 SMPD3Q9NY59 655 aaPredicted RBP12.99□□□□□ -0.33
SCLT1-204ENST00000503215 MEIKINA0A087WXM9 373 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 KBTBD11-OT1A0A1B0GTJ5 212 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 LEUTXA8MZ59 168 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 BUB1B-PAK6H3BSN5 160 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 HTR3BO95264 441 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 GLP1RP43220 463 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 VDAC2P45880 294 aaPredicted RBP12.98□□□□□ -0.33
SCLT1-204ENST00000503215 RBM39Q14498 530 aaKnown RBP12.98□□□□□ -0.33
SCLT1-204ENST00000503215 HLA-DRB5Q30154 266 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 TCTEX1D4Q5JR98 221 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 RPL22L1Q6P5R6 122 aaKnown RBP12.98□□□□□ -0.33
SCLT1-204ENST00000503215 ASCL4Q6XD76 172 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 DTX3Q8N9I9 347 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 ZNF555Q8NEP9 628 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 OR4D6Q8NGJ1 314 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 RFESDQ8TAC1 157 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 KIRREL1Q96J84 757 aa12.98□□□□□ -0.33
SCLT1-204ENST00000503215 A0A087X0M5 115 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 A0A1B0GX30 115 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 A0A1W2PRX2 142 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 ZNF729A6NN14 1252 aaPredicted RBP12.97□□□□□ -0.33
SCLT1-204ENST00000503215 TOR1AO14656 332 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 OGG1O15527 345 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 TNFAIP8O95379 198 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 DIAPH2-AS1Q14236 149 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 LTC4SQ16873 150 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 OXLD1Q5BKU9 147 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 ARSJQ5FYB0 599 aaPredicted RBP12.97□□□□□ -0.33
SCLT1-204ENST00000503215 OGFRL1Q5TC84 451 aaPredicted RBP12.97□□□□□ -0.33
SCLT1-204ENST00000503215 RSBN1Q5VWQ0 802 aaPredicted RBP12.97□□□□□ -0.33
SCLT1-204ENST00000503215 C10orf99Q6UWK7 81 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 NDUFA11Q86Y39 141 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 ZFP41Q8N8Y5 198 aa12.97□□□□□ -0.33
SCLT1-204ENST00000503215 Q8NFD4 153 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms