RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ZNF826PQ6ZT77 177 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 OR5M8Q8NGP6 311 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 SYT3Q9BQG1 590 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 LIME1Q9H400 295 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 SHPKQ9UHJ6 478 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 C3orf80F5H4A9 247 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 THBDP07204 575 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 CTXN2P0C2S0 81 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 FCGR2CP31995 323 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 SRSF4Q08170 494 aaKnown RBP18.6■□□□□ 0.57
PTPN13-205ENST00000502971 DCAF12L2Q5VW00 463 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 CASTOR1Q8WTX7 329 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 TMEM246Q9BRR3 403 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 SLC23A1Q9UHI7 598 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 HSPB11Q9Y547 144 aa18.6■□□□□ 0.57
PTPN13-205ENST00000502971 RGS13O14921 159 aa18.59■□□□□ 0.57
PTPN13-205ENST00000502971 SNAPC5O75971 98 aa18.59■□□□□ 0.57
PTPN13-205ENST00000502971 HAND1O96004 215 aa18.59■□□□□ 0.57
PTPN13-205ENST00000502971 PI3P19957 117 aa18.59■□□□□ 0.57
PTPN13-205ENST00000502971 ASCL1P50553 236 aa18.59■□□□□ 0.57
PTPN13-205ENST00000502971 UCP3P55916 312 aa18.59■□□□□ 0.57
PTPN13-205ENST00000502971 LY6G6FQ5SQ64 297 aa18.59■□□□□ 0.57
PTPN13-205ENST00000502971 ACP7Q6ZNF0 438 aa18.59■□□□□ 0.57
PTPN13-205ENST00000502971 SLA2Q9H6Q3 261 aa18.59■□□□□ 0.57
PTPN13-205ENST00000502971 TMEM165Q9HC07 324 aa18.59■□□□□ 0.57
PTPN13-205ENST00000502971 ZSCAN5BA6NJL1 495 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 SIRPB1O00241 398 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 ZNF728P0DKX0 622 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 LMO1P25800 156 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 GMFBP60983 142 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 Q5BKY6 102 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 CLEC18BQ6UXF7 455 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 OR10Z1Q8NGY1 313 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 MRPL24Q96A35 216 aaKnown RBP18.58■□□□□ 0.57
PTPN13-205ENST00000502971 MOB3AQ96BX8 217 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 ELMOD3Q96FG2 381 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 GON7Q9BXV9 100 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 TMPRSS13Q9BYE2 586 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 MRPL37Q9BZE1 423 aaKnown RBP18.58■□□□□ 0.57
PTPN13-205ENST00000502971 FXYD6Q9H0Q3 95 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 NGBQ9NPG2 151 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 UFSP2Q9NUQ7 469 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 C1orf123Q9NWV4 160 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 RASL12Q9NYN1 266 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 TAAR3PQ9P1P4 343 aa18.58■□□□□ 0.57
PTPN13-205ENST00000502971 ZFYVE26Q68DK2 2539 aa18.58■□□□□ 0.56
PTPN13-205ENST00000502971 DPRXA6NFQ7 191 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 DBX1A6NMT0 343 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 KNG1P01042 644 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 SUPT4H1P63272 117 aaKnown RBP18.57■□□□□ 0.56
PTPN13-205ENST00000502971 IGSF11Q5DX21 431 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 MOB1BQ7L9L4 216 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 GAPTQ8N292 157 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 COQ8AQ8NI60 647 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 PRR7Q8TB68 274 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 hCG_1807616A0A1W2PRN6 198 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 TK1P04183 234 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 SCTP09683 121 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 RPS2P15880 293 aaKnown RBP18.57■□□□□ 0.56
PTPN13-205ENST00000502971 CFHR2P36980 270 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 HERV-K104P61576 105 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 SEC61A1P61619 476 aaKnown RBP18.57■□□□□ 0.56
PTPN13-205ENST00000502971 SMIM21Q3B7S5 101 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 ZNF497Q6ZNH5 498 aa18.57■□□□□ 0.56
PTPN13-205ENST00000502971 RP1L1Q8IWN7 2480 aaPredicted RBP18.56■□□□□ 0.56
PTPN13-205ENST00000502971 CCL21O00585 134 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 ABCD4O14678 606 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 WNT9BO14905 357 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 C20orf204Q6ZNR8 217 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 KCTD9Q7L273 389 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 SLC38A6Q8IZM9 456 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 ASCC1Q8N9N2 400 aaKnown RBP18.56■□□□□ 0.56
PTPN13-205ENST00000502971 OR4A4PQ8NGN8 299 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 GRPEL2Q8TAA5 225 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 LRRC29Q8WV35 223 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 TOMM40LQ969M1 308 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 PIK3IP1Q96FE7 263 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 WDR89Q96FK6 387 aaPredicted RBP18.56■□□□□ 0.56
PTPN13-205ENST00000502971 MEGF10Q96KG7 1140 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 OR14J1Q9UGF5 321 aa18.56■□□□□ 0.56
PTPN13-205ENST00000502971 IFNL4K9M1U5 179 aa18.55■□□□□ 0.56
PTPN13-205ENST00000502971 DIRAS3O95661 229 aa18.55■□□□□ 0.56
PTPN13-205ENST00000502971 AADACP22760 399 aa18.55■□□□□ 0.56
PTPN13-205ENST00000502971 CHRNB4P30926 498 aa18.55■□□□□ 0.56
PTPN13-205ENST00000502971 HLA-DRB3P79483 266 aa18.55■□□□□ 0.56
PTPN13-205ENST00000502971 BSPH1Q075Z2 132 aa18.55■□□□□ 0.56
PTPN13-205ENST00000502971 SLC9A3R2Q15599 337 aa18.55■□□□□ 0.56
PTPN13-205ENST00000502971 FBXL19-AS1Q494R0 122 aa18.55■□□□□ 0.56
PTPN13-205ENST00000502971 SGPP2Q8IWX5 399 aa18.55■□□□□ 0.56
PTPN13-205ENST00000502971 WFIKKN1Q96NZ8 548 aa18.55■□□□□ 0.56
PTPN13-205ENST00000502971 CRYM-AS1A6NIL9 109 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 PPYP01298 95 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 CD8AP01732 235 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 NFYAP23511 347 aaPredicted RBP18.54■□□□□ 0.56
PTPN13-205ENST00000502971 ZNF81P51508 661 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 FXYD4P59646 89 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 FAM90A1Q86YD7 464 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 PLPPR1Q8TBJ4 325 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 OR2V2Q96R30 315 aa18.54■□□□□ 0.56
PTPN13-205ENST00000502971 ZDHHC8Q9ULC8 765 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms