RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 A0A0J9YX75 114 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 LOC100653049A0A140TA62 436 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 ANKRD20A5PA0PJZ0 165 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 PGPA6NDG6 321 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 RBFOX3A6NFN3 312 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 ODF3BA8MYP8 253 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 H3BP45 60 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 AKR7A2O43488 359 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 KRT34O76011 436 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 GPX1P07203 203 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 M6PRP20645 277 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 EVI2BP34910 448 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 ARR3P36575 388 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 P2RY2P41231 377 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 GPR4P46093 362 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 EMP2P54851 167 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 GOLGA7BQ2TAP0 167 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 ELP2Q6IA86 826 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 NIT1Q86X76 327 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 SELENOHQ8IZQ5 122 aaKnown RBP0.63□□□□□ -2.31
SMAD1-203ENST00000502342 FAM58AQ8N1B3 248 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 ATPAF2Q8N5M1 289 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 FBXO36Q8NEA4 188 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 CLHC1Q8NHS4 586 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 ZNF563Q8TA94 476 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 CASTOR1Q8WTX7 329 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 PDCD6IPQ8WUM4 868 aaKnown RBP0.63□□□□□ -2.31
SMAD1-203ENST00000502342 CENPNQ96H22 339 aaPredicted RBP0.63□□□□□ -2.31
SMAD1-203ENST00000502342 OR2AG1Q9H205 316 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 BLZF1Q9H2G9 400 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 POMKQ9H5K3 350 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 DIABLOQ9NR28 239 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 DNAJC27Q9NZQ0 273 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 RHBDD3Q9Y3P4 386 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 LINC00588Q9Y4M8 146 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 TRPM6Q9BX84 2022 aa0.63□□□□□ -2.31
SMAD1-203ENST00000502342 TRAV8-3A0A0A6YYJ7 113 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 A8MWP6 167 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 SPOPO43791 374 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 ALOX12BO75342 701 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 MYO1DO94832 1006 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 FGF4P08620 206 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 ZNF7P17097 686 aaPredicted RBP0.62□□□□□ -2.31
SMAD1-203ENST00000502342 GABRA4P48169 554 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 BCAP31P51572 246 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 C2orf80Q0P641 193 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 TSPAN31Q12999 210 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 DYNC1I2Q13409 638 aaKnown RBP0.62□□□□□ -2.31
SMAD1-203ENST00000502342 TAL2Q16559 108 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 NDUFAF6Q330K2 333 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 PIP5KL1Q5T9C9 394 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 C16orf87Q6PH81 154 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 CCDC121Q6ZUS5 278 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 C10orf107Q8IVU9 208 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 SLC25A45Q8N413 288 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 ERMNQ8TAM6 284 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 SPPL2BQ8TCT7 592 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 NELFBQ8WX92 580 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 CACNG8Q8WXS5 425 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 CCL17Q92583 94 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 REEP6Q96HR9 211 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 VAT1Q99536 393 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 APOL4Q9BPW4 351 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 CHRNA10Q9GZZ6 450 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 PRORYQ9H606 182 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 PEF1Q9UBV8 284 aaKnown RBP0.62□□□□□ -2.31
SMAD1-203ENST00000502342 PSORS1C2Q9UIG4 136 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 BTRCQ9Y297 605 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 KPTNQ9Y664 436 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 ATRNO75882 1429 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 PHLPP2Q6ZVD8 1323 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 NEURL4Q96JN8 1562 aa0.62□□□□□ -2.31
SMAD1-203ENST00000502342 PXDNLA1KZ92 1463 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 AQRO60306 1485 aaKnown RBP eCLIP0.61□□□□□ -2.31
SMAD1-203ENST00000502342 LOC102725191A0A1B0GVB3 256 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 IGSF23A1L1A6 192 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 VPS37CA5D8V6 355 aaPredicted RBP0.61□□□□□ -2.31
SMAD1-203ENST00000502342 TVP23AA6NH52 213 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 ZNF593O00488 134 aaPredicted RBP0.61□□□□□ -2.31
SMAD1-203ENST00000502342 TOR1AO14656 332 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 ENSAO43768 121 aaKnown RBP0.61□□□□□ -2.31
SMAD1-203ENST00000502342 LYNX1P0DP58 116 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 CCT6AP40227 531 aaKnown RBP0.61□□□□□ -2.31
SMAD1-203ENST00000502342 WDR43Q15061 677 aaKnown RBP eCLIP0.61□□□□□ -2.31
SMAD1-203ENST00000502342 MMDQ15546 238 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 CEACAM16Q2WEN9 425 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 HIKESHIQ53FT3 197 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 TPGS1Q6ZTW0 290 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 ARHGAP18Q8N392 663 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 KRTCAP2Q8N6L1 136 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 OR4X1Q8NH49 305 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 OR51Q1Q8NH59 317 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 KCTD4Q8WVF5 259 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 GPR22Q99680 433 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 MRPL32Q9BYC8 188 aaKnown RBP0.61□□□□□ -2.31
SMAD1-203ENST00000502342 NXF2Q9GZY0 626 aaKnown RBP0.61□□□□□ -2.31
SMAD1-203ENST00000502342 FBXL3Q9UKT7 428 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 POMPQ9Y244 141 aa0.61□□□□□ -2.31
SMAD1-203ENST00000502342 AMMECR1Q9Y4X0 333 aaPredicted RBP0.61□□□□□ -2.31
SMAD1-203ENST00000502342 RGS12O14924 1447 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms