RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SLC10A1Q14973 349 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 C17orf58Q2M2W7 97 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 TMEM176BQ3YBM2 270 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 UBE2UQ5VVX9 321 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 LRRN1Q6UXK5 716 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 PXT1Q8NFP0 134 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR10W1Q8NGF6 305 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR6Q1Q8NGQ2 317 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 RAB8BQ92930 207 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 LYSMD1Q96S90 227 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 CLEC7AQ9BXN2 247 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 PRORYQ9H606 182 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 RPF2Q9H7B2 306 aaKnown RBP3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 DDX31Q9H8H2 851 aaKnown RBP3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR1A1Q9P1Q5 309 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 THAP10Q9P2Z0 257 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 FARSAQ9Y285 508 aaKnown RBP3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR51B4Q9Y5P0 310 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 SDK1Q7Z5N4 2213 aa3.39□□□□□ -1.87
HMGB1P21-201ENST00000502313 IGSF10Q6WRI0 2623 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 EFCAB9A8MZ26 197 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 SMIM1B2RUZ4 78 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 C12orf77C9JDV5 145 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 TNFRSF11BO00300 401 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF593O00488 134 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC17A2O00624 439 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 UBDO15205 165 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 FABP7O15540 132 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 SYNGR1O43759 233 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 FADS1O60427 444 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 ENTPD6O75354 484 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 SEMA4FO95754 770 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 RENP00797 406 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 IGKV1D-16P01601 117 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 IGLV3-19P01714 112 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 IFNGR2P38484 337 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 CD79BP40259 229 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 OMPP47874 163 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 CYB561P49447 251 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 DLX1P56177 255 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 LINC00205P59089 165 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC35A1P78382 337 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 S100A12P80511 92 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF146Q15072 292 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 PRSS8Q16651 343 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 HLA-DRB5Q30154 266 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 CEACAM21Q3KPI0 293 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF585BQ52M93 769 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 YIF1BQ5BJH7 314 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF324BQ6AW86 544 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 CBR4Q8N4T8 237 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 SPICQ8N5J4 248 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 NATD1Q8N6N6 113 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 ACBD4Q8NC06 268 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR4K17Q8NGC6 315 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 HAVCR2Q8TDQ0 301 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 CASTOR1Q8WTX7 329 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 SKA2Q8WVK7 121 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC35B4Q969S0 331 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 TMEM230Q96A57 120 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 TMEM159Q96B96 161 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 MRAP2Q96G30 205 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 PGLYRP3Q96LB9 341 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 KLF6Q99612 283 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 DOK1Q99704 481 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 PCBD2Q9H0N5 130 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 ARV1Q9H2C2 271 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 PDFQ9HBH1 243 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 PARVBQ9HBI1 364 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 AMBNQ9NP70 447 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 EXD2Q9NVH0 621 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 FAM206AQ9NX38 181 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 TAS2R7Q9NYW3 318 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 TREM2Q9NZC2 230 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 TMEM216Q9P0N5 145 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 NDUFAF1Q9Y375 327 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 CACNG2Q9Y698 323 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 MYO18AQ92614 2054 aaKnown RBP3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 MYOFQ9NZM1 2061 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 MAP1BP46821 2468 aaKnown RBP3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 PLXND1Q9Y4D7 1925 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 EML5Q05BV3 1969 aa3.38□□□□□ -1.87
HMGB1P21-201ENST00000502313 MIA3Q5JRA6 1907 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 A0A087WW49 117 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 TGIF2-C20orf24A0A0A6YYL0 155 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 A6NDN8 102 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 KPNA3O00505 521 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 SNAP91O60641 907 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 BANF1O75531 89 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 STK16O75716 305 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 GATBO75879 557 aaKnown RBP3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 GLSO94925 669 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 KRT75O95678 551 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 MPC1LP0DKB6 136 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 CT45A10P0DMU9 189 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 HIST1H1EP10412 219 aaKnown RBP3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 IDO1P14902 403 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 PAX1P15863 534 aa3.37□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF17P17021 662 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms