RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 LIAT1Q6ZQX7 453 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 OR1J1Q8NGS3 322 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 RTN4IP1Q8WWV3 396 aaPredicted RBP12.53□□□□□ -0.4
NEAT1-201ENST00000499732 C18orf12Q96KH6 178 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 HDHD3Q9BSH5 251 aaPredicted RBP12.53□□□□□ -0.4
NEAT1-201ENST00000499732 FOXD3Q9UJU5 478 aaPredicted RBP12.53□□□□□ -0.4
NEAT1-201ENST00000499732 MGAQ8IWI9 3026 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 FAM166BA8MTA8 275 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 SGCEO43556 437 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 SNRNP70P08621 437 aaKnown RBP12.53□□□□□ -0.4
NEAT1-201ENST00000499732 MEOX1P50221 254 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 LGI3Q8N145 548 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 TMEM251Q8N6I4 163 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 ZFP62Q8NB50 900 aaPredicted RBP12.53□□□□□ -0.4
NEAT1-201ENST00000499732 NANPQ8TBE9 248 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 HPSE2Q8WWQ2 592 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 INTS12Q96CB8 462 aaKnown RBP12.53□□□□□ -0.4
NEAT1-201ENST00000499732 EIF5A2Q9GZV4 153 aaKnown RBP12.53□□□□□ -0.4
NEAT1-201ENST00000499732 SPACA1Q9HBV2 294 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 AK3Q9UIJ7 227 aa12.53□□□□□ -0.4
NEAT1-201ENST00000499732 FLNBO75369 2602 aaKnown RBP12.52□□□□□ -0.4
NEAT1-201ENST00000499732 DNAJC13O75165 2243 aa12.52□□□□□ -0.4
NEAT1-201ENST00000499732 ZNF850A8MQ14 1090 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 J3QKU1 62 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 M0R036 132 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 DHHO43323 396 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 IGHV2-5P01817 119 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 ZNF14P17017 642 aaPredicted RBP12.52□□□□□ -0.41
NEAT1-201ENST00000499732 RAB5AP20339 215 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 ACKR3P25106 362 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 MAS1LP35410 378 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 LHX2P50458 406 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 UCP3P55916 312 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 MTCP1P56278 107 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 PLGLB1Q02325 96 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 RSU1Q15404 277 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 RSPO1Q2MKA7 263 aaPredicted RBP12.52□□□□□ -0.41
NEAT1-201ENST00000499732 DMRTC1Q5HYR2 192 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 LURAP1LQ8IV03 231 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 OR8G5Q8NG78 346 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 SYT3Q9BQG1 590 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 SLC35B3Q9H1N7 401 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 LIME1Q9H400 295 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 ZNF407Q9C0G0 2248 aa12.52□□□□□ -0.41
NEAT1-201ENST00000499732 TRAV17A0A0B4J275 112 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 UMAD1C9J7I0 102 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 ST8SIA3O43173 380 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 GLAP06280 429 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 FABP1P07148 127 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 CHATP28329 748 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 NTF4P34130 210 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 AKR1C3P42330 323 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 CLDN18P56856 261 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 IGFL3Q6UXB1 125 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 ASCL4Q6XD76 172 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 LHFPL2Q6ZUX7 228 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 C20orf196Q8IYI0 205 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 CCDC71LQ8N9Z2 235 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 TOMM40LQ969M1 308 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 CPNE4Q96A23 557 aaPredicted RBP12.51□□□□□ -0.41
NEAT1-201ENST00000499732 MSI2Q96DH6 328 aaKnown RBP12.51□□□□□ -0.41
NEAT1-201ENST00000499732 ZNF845Q96IR2 970 aaPredicted RBP12.51□□□□□ -0.41
NEAT1-201ENST00000499732 WFDC1Q9HC57 220 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 KCNJ16Q9NPI9 418 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 SLC2A9Q9NRM0 540 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 GPR173Q9NS66 373 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 PLEK2Q9NYT0 353 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 TMED3Q9Y3Q3 217 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 A0A1W2PPH5 198 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 A6NLC8 198 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 PRH1P02810 166 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 SULT1A1P50225 295 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 OR8B8Q15620 311 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 KRBOX4Q5JUW0 171 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 FBXW12Q6X9E4 464 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.51□□□□□ -0.41
NEAT1-201ENST00000499732 C1QL4Q86Z23 238 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 MOB3AQ96BX8 217 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 BSCL2Q96G97 398 aaPredicted RBP12.51□□□□□ -0.41
NEAT1-201ENST00000499732 FAAP24Q9BTP7 215 aa12.51□□□□□ -0.41
NEAT1-201ENST00000499732 K7N7A8 449 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 CYTIPO60759 359 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 SFTPCP11686 197 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 CRYGSP22914 178 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 SRPXP78539 464 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 LY6DQ14210 128 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 CLINT1Q14677 625 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 RAB35Q15286 201 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 TAF9Q16594 264 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 SNAI3Q3KNW1 292 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 RBMS3Q6XE24 437 aaKnown RBP12.5□□□□□ -0.41
NEAT1-201ENST00000499732 LYZL2Q7Z4W2 148 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 LRRC18Q8N456 261 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 ZADH2Q8N4Q0 377 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 OR4D5Q8NGN0 318 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 SGK3Q96BR1 496 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 PARP12Q9H0J9 701 aaKnown RBP12.5□□□□□ -0.41
NEAT1-201ENST00000499732 ZNF286AQ9HBT8 521 aa12.5□□□□□ -0.41
NEAT1-201ENST00000499732 IL36GQ9NZH8 169 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms