RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 Q9N2K0 584 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 DLL4Q9NR61 685 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 CBLN4Q9NTU7 201 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 ELF5Q9UKW6 265 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-210ENST00000498259 KCNIP3Q9Y2W7 256 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 ALG5Q9Y673 324 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 SHANK1Q9Y566 2161 aa7.13□□□□□ -1.27
SF3A1-210ENST00000498259 HEATR1Q9H583 2144 aaKnown RBP7.13□□□□□ -1.27
SF3A1-210ENST00000498259 TRAV24A0A0B4J272 114 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 FAM172BPA6NC97 362 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 OOEPA6NGQ2 149 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 CEACAM18A8MTB9 384 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 SIRPB1O00241 398 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 HSPB6O14558 160 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 FABP7O15540 132 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 SSX4O60224 188 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 GSTT2P0CG29 244 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 PGAM2P15259 253 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 FPR2P25090 351 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 GABRA2P47869 451 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 UQCRFS1P47985 274 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 UCP3P55916 312 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 CCL8P80075 99 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 MRPS11P82912 194 aaKnown RBP7.12□□□□□ -1.27
SF3A1-210ENST00000498259 TMEM30BQ3MIR4 351 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 ABCA11PQ4W5N1 156 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 TMEM128Q5BJH2 165 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 FAAP20Q6NZ36 180 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF497Q6ZNH5 498 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF826PQ6ZT77 177 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 TMED4Q7Z7H5 227 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 DMRTC2Q8IXT2 367 aaPredicted RBP7.12□□□□□ -1.27
SF3A1-210ENST00000498259 CMTM1Q8IZ96 169 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 SLC38A6Q8IZM9 456 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 FAM185AQ8N0U4 392 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 BATF2Q8N1L9 274 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 ASCC1Q8N9N2 400 aaKnown RBP7.12□□□□□ -1.27
SF3A1-210ENST00000498259 CCDC71LQ8N9Z2 235 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 OR4D10Q8NGI6 311 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 NEU4Q8WWR8 484 aaPredicted RBP7.12□□□□□ -1.27
SF3A1-210ENST00000498259 NINJ1Q92982 152 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 GALMQ96C23 342 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 KIRREL1Q96J84 757 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 PHB2Q99623 299 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 WDR13Q9H1Z4 485 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF665Q9H7R5 613 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 OR6C3Q9NZP0 311 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 LPAR3Q9UBY5 353 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF230Q9UIE0 474 aaPredicted RBP7.12□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF221Q9UK13 617 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 MYO7BQ6PIF6 2116 aa7.12□□□□□ -1.27
SF3A1-210ENST00000498259 PPIAL4EA0A075B759 164 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 A0A0A6YYJ9 748 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 IGHV1-69-2A0A0G2JMI3 117 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 IGHV3-64DA0A0J9YX35 117 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 DEFB108AA8MXU0 73 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 PPIAL4DF5H284 164 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 PYCARD-AS1I3L0S3 204 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 LGALS8O00214 317 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 SPINT2O43291 252 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 HSPA12AO43301 675 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 B3GALNT1O75752 331 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 SLC22A5O76082 557 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF735P0CB33 412 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 PPIAL4FP0DN26 164 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 PSG2P11465 335 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 ZBTB25P24278 435 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 FCGR2CP31995 323 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 GMFBP60983 142 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 IL13RA1P78552 427 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 HLA-DRB3P79483 266 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 COL10A1Q03692 680 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 PDCD1Q15116 288 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 MSMPQ1L6U9 139 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 SWI5Q1ZZU3 235 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 KRBOX4Q5JUW0 171 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 TEX36Q5VZQ5 186 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF626Q68DY1 528 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 BRICD5Q6PL45 260 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 SLC25A42Q86VD7 318 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 LHFPL1Q86WI0 220 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 SGPP2Q8IWX5 399 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 GAPTQ8N292 157 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 GCSAMQ8N6F7 178 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 BOLLQ8N9W6 283 aaKnown RBP7.11□□□□□ -1.27
SF3A1-210ENST00000498259 TMEM185AQ8NFB2 350 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 OR5T2Q8NGG2 359 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 COQ8AQ8NI60 647 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 MRPL30Q8TCC3 161 aaKnown RBP7.11□□□□□ -1.27
SF3A1-210ENST00000498259 TIMD4Q96H15 378 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 LURAP1Q96LR2 239 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF2Q9BSG1 426 aaPredicted RBP7.11□□□□□ -1.27
SF3A1-210ENST00000498259 GHITMQ9H3K2 345 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 MBNL3Q9NUK0 354 aaKnown RBP7.11□□□□□ -1.27
SF3A1-210ENST00000498259 TMEM106BQ9NUM4 274 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 ZNF69Q9UC07 566 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 PPIAL4AQ9Y536 164 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 ZZEF1O43149 2961 aa7.11□□□□□ -1.27
SF3A1-210ENST00000498259 ESPL1Q14674 2120 aa7.1□□□□□ -1.27
SF3A1-210ENST00000498259 MEIKINA0A087WXM9 373 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms