RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 AMMECR1LQ6DCA0 310 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 DGAT2L6Q6ZPD8 337 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 Q6ZQT7 251 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 SSX7Q7RTT5 188 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 ADM2Q7Z4H4 148 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 ZFP82Q8N141 532 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 SLC25A45Q8N413 288 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 ZNF738Q8NE65 137 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 OR2K2Q8NGT1 345 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 DTD1Q8TEA8 209 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 TVP23CQ96ET8 276 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 MRAP2Q96G30 205 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 FAAP24Q9BTP7 215 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 TAPBPLQ9BX59 468 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 ZNF436Q9C0F3 470 aaPredicted RBP2.06□□□□□ -2.08
SMC4-225ENST00000497203 CHMP4BQ9H444 224 aaKnown RBP2.06□□□□□ -2.08
SMC4-225ENST00000497203 ASF1BQ9NVP2 202 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 ENPP5Q9UJA9 477 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 ICOSQ9Y6W8 199 aa2.06□□□□□ -2.08
SMC4-225ENST00000497203 POLR3AO14802 1390 aaPredicted RBP2.06□□□□□ -2.08
SMC4-225ENST00000497203 IGKV1OR2-108A0A075B7D4 117 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 A0A1B0GX12 115 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 ZNF729A6NN14 1252 aaPredicted RBP2.05□□□□□ -2.08
SMC4-225ENST00000497203 C15orf65H3BRN8 121 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 PSIP1O75475 530 aaKnown RBP2.05□□□□□ -2.08
SMC4-225ENST00000497203 POP7O75817 140 aaKnown RBP2.05□□□□□ -2.08
SMC4-225ENST00000497203 KLHL2O95198 593 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 TNFAIP8O95379 198 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 IGLV6-57P01721 117 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 SLC35E2BP0CK96 405 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 ATF1P18846 271 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 PRPS1L1P21108 318 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 OR2B6P58173 313 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 C1QTNF8P60827 252 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 IHHQ14623 411 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 LGALSLQ3ZCW2 172 aaPredicted RBP2.05□□□□□ -2.08
SMC4-225ENST00000497203 PDZD11Q5EBL8 140 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 SPIN3Q5JUX0 258 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 OLIG3Q7RTU3 272 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 TMEM25Q86YD3 366 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 ZNF664Q8N3J9 261 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 ACTL9Q8TC94 416 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 GTF2H4Q92759 462 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 CLDN23Q96B33 292 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 CCDC127Q96BQ5 260 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 DDIT4LQ96D03 193 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 FXYD5Q96DB9 178 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 OTUB2Q96DC9 234 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 ATP6V1G3Q96LB4 118 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 PGLYRP3Q96LB9 341 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 HBEGFQ99075 208 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 MED10Q9BTT4 135 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 NID2Q14112 1375 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 KIAA0232Q92628 1395 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 SSH2Q76I76 1423 aa2.05□□□□□ -2.08
SMC4-225ENST00000497203 IGHV1-45A0A0A0MS14 117 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 SULT1C2O00338 296 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 SPNP16150 400 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 CD34P28906 385 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 MAGEA6P43360 314 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 RHOAP61586 193 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 CACNA1DQ01668 2161 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 XRCC4Q13426 336 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 RAB31Q13636 194 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 ZBTB6Q15916 424 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 DEFB134Q4QY38 66 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 MAP3K19Q56UN5 1328 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 OR10J3Q5JRS4 329 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 RBM48Q5RL73 367 aaKnown RBP2.04□□□□□ -2.08
SMC4-225ENST00000497203 ZIC4Q8N9L1 334 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 GATD1Q8NB37 220 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 CMTM2Q8TAZ6 248 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 LRRC45Q96CN5 670 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 GABARAPL1Q9H0R8 117 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 TAS2R13Q9NYV9 303 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 COMMD9Q9P000 198 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 NAGKQ9UJ70 344 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 POMPQ9Y244 141 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 R4GN34 69 aa2.04□□□□□ -2.08
SMC4-225ENST00000497203 TRIOBPQ9H2D6 2365 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 SDK2Q58EX2 2172 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 YLPM1P49750 1951 aaKnown RBP2.03□□□□□ -2.08
SMC4-225ENST00000497203 ATRNO75882 1429 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 SPATA31E1Q6ZUB1 1445 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 IQCF5A8MTL0 148 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 UGT2B11O75310 529 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 GPR75O95800 540 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 PDYNP01213 254 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 TRGV3P03979 118 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 HRES1P13985 223 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 SYT1P21579 422 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 HSPA13P48723 471 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 FOXA1P55317 472 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 TAF9Q16594 264 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 ZNF470Q6ECI4 717 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 LYZL2Q7Z4W2 148 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 ANGPTL6Q8NI99 470 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 PDCD6IPQ8WUM4 868 aaKnown RBP2.03□□□□□ -2.08
SMC4-225ENST00000497203 CMBLQ96DG6 245 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms