RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 GALNT10Q86SR1 603 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 NT5DC3Q86UY8 548 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 ITPRIPQ8IWB1 547 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 BOD1L2Q8IYS8 172 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 ZDHHC22Q8N966 263 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 ZNF555Q8NEP9 628 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 ACTL9Q8TC94 416 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 RNASEH2CQ8TDP1 164 aaKnown RBP1.1□□□□□ -2.23
VPS26A-208ENST00000497022 ANKRD7Q92527 254 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 YIPF6Q96EC8 236 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 MRAP2Q96G30 205 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 FMC1Q96HJ9 113 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 FAM210AQ96ND0 272 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 GPR82Q96P67 336 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 APOL4Q9BPW4 351 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 ZNF251Q9BRH9 671 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 SUCNR1Q9BXA5 334 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 MS4A8Q9BY19 250 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 UPF3BQ9BZI7 483 aaKnown RBP1.1□□□□□ -2.23
VPS26A-208ENST00000497022 TSGA10Q9BZW7 698 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 MFSD1Q9H3U5 465 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 POMKQ9H5K3 350 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 RDH14Q9HBH5 336 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 PARP11Q9NR21 331 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 DIABLOQ9NR28 239 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 C1orf109Q9NX04 203 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 RBM12B-AS1Q9P1G2 102 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 PUS1Q9Y606 427 aaKnown RBP eCLIP1.1□□□□□ -2.23
VPS26A-208ENST00000497022 ICE1Q9Y2F5 2266 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 ELP1O95163 1332 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 NRCAMQ92823 1304 aa1.1□□□□□ -2.23
VPS26A-208ENST00000497022 KIAA0232Q92628 1395 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 A0A1W2PRG6 482 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 MYBPHLA2RUH7 354 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 PGPA6NDG6 321 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 CD300LBA8K4G0 201 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 CEACAM18A8MTB9 384 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 H3BP45 60 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 I3L4J1 428 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 ITGB1BP1O14713 200 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 TOX3O15405 576 aaPredicted RBP1.09□□□□□ -2.23
VPS26A-208ENST00000497022 GYG2O15488 501 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 MPZL2O60487 215 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 PDCD6O75340 191 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 ENTPD6O75354 484 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 CNMDO75829 334 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 CXorf1O96002 111 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 SEC11BP0C7V7 166 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 OCMP0CE72 109 aaPredicted RBP1.09□□□□□ -2.23
VPS26A-208ENST00000497022 SLC2A1P11166 492 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 HRES1P13985 223 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 PRTN3P24158 256 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 ELK4P28324 431 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 SLC6A1P30531 599 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 IDH2P48735 452 aaKnown RBP1.09□□□□□ -2.23
VPS26A-208ENST00000497022 C1QTNF8P60827 252 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 RAB8AP61006 207 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 HBG1P69891 147 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 HBG2P69892 147 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 COTL1Q14019 142 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 ELOCQ15369 112 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 ZNHIT3Q15649 155 aaPredicted RBP1.09□□□□□ -2.23
VPS26A-208ENST00000497022 SSX1Q16384 188 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 SP6Q3SY56 376 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 DEFB134Q4QY38 66 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 HSP90B2PQ58FF3 399 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 UBE2NLQ5JXB2 153 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 TIMM23BQ5SRD1 257 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 ZNF678Q5SXM1 525 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 NIPAL1Q6NVV3 410 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 MED27Q6P2C8 311 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 PRSS54Q6PEW0 395 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 DGAT2L6Q6ZPD8 337 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 FAM183BPQ6ZVS7 135 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 USP50Q70EL3 339 aaPredicted RBP1.09□□□□□ -2.23
VPS26A-208ENST00000497022 FA2HQ7L5A8 372 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 LINC00596Q86U02 117 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 C10orf107Q8IVU9 208 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 STK40Q8N2I9 435 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 ZNF565Q8N9K5 539 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 GATD1Q8NB37 220 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 ATP6V1C2Q8NEY4 427 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 OR6K3Q8NGY3 331 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 OR5AK3PQ8NH89 298 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 DYNC2LI1Q8TCX1 351 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 DDI1Q8WTU0 396 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.09□□□□□ -2.23
VPS26A-208ENST00000497022 DDIT4LQ96D03 193 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 ZNF514Q96K75 400 aaPredicted RBP1.09□□□□□ -2.23
VPS26A-208ENST00000497022 PGLYRP3Q96LB9 341 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 TMEM56Q96MV1 263 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 YPEL4Q96NS1 127 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 DERL3Q96Q80 235 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 C7orf50Q9BRJ6 194 aaKnown RBP1.09□□□□□ -2.23
VPS26A-208ENST00000497022 FAAP24Q9BTP7 215 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 TAPBPLQ9BX59 468 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 SLC25A31Q9H0C2 315 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 LINC00574Q9H8X3 128 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 RHOFQ9HBH0 211 aa1.09□□□□□ -2.23
VPS26A-208ENST00000497022 ASCL3Q9NQ33 180 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms