RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 VSIG4Q9Y279 399 aa2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 TNRC6BQ9UPQ9 1833 aaKnown RBP2.81□□□□□ -1.96
EXOSC3-208ENST00000496910 TMEM131Q92545 1883 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 FUOMA2VDF0 154 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 KCNK1O00180 336 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 SAP18O00422 153 aaKnown RBP2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 KPNA3O00505 521 aaPredicted RBP2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 SSNA1O43805 119 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 FADS1O60427 444 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 RAD1O60671 282 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 ENTPD6O75354 484 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 CRLF1O75462 422 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 SLC22A5O76082 557 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 TTC4O95801 387 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 LY6G6DO95868 133 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 TNNC2P02585 160 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 IGKV5-2P06315 115 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 MELTFP08582 738 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 MT3P25713 68 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 IFNGR2P38484 337 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 CYB561P49447 251 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 RAB38P57729 211 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 GNB1P62873 340 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 RPL32P62910 135 aaKnown RBP2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 CACNG7P62955 275 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 CYCSP99999 105 aaKnown RBP2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM53BQ14153 422 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 HLA-DRB5Q30154 266 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 CNPY1Q3B7I2 92 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 TTLL9Q3SXZ7 439 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 XKRXQ6PP77 449 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 BAIAP2L2Q6UXY1 529 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF620Q6ZNG0 422 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 MRPL55Q7Z7F7 128 aaKnown RBP2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 LYG2Q86SG7 212 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 NT5DC3Q86UY8 548 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 NPWQ8N729 165 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 NUP37Q8NFH4 326 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 PXT1Q8NFP0 134 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 GPR32P1Q8NGA4 272 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 OR10AD1Q8NGE0 317 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 OR6Q1Q8NGQ2 317 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 OR10Z1Q8NGY1 313 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 ACTRT1Q8TDG2 376 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 SDR42E1Q8WUS8 393 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 TMEM190Q8WZ59 177 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 SLC35B4Q969S0 331 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 C18orf12Q96KH6 178 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 DOK1Q99704 481 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 RIOK2Q9BVS4 552 aaKnown RBP2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 OCR1Q9BZK8 76 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 MAP1LC3AQ9H492 121 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 ASB7Q9H672 318 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF696Q9H7X3 374 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 FBXO6Q9NRD1 293 aaPredicted RBP2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 INIPQ9NRY2 104 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 NDE1Q9NXR1 346 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 TREM2Q9NZC2 230 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 MDFICQ9P1T7 246 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 VAX2Q9UIW0 290 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 NDRG2Q9UN36 371 aaKnown RBP2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 PYGO1Q9Y3Y4 419 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 CACNG2Q9Y698 323 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 CACNA1CQ13936 2221 aa2.8□□□□□ -1.96
EXOSC3-208ENST00000496910 CMYA5Q8N3K9 4069 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 IGHV1OR15-1A0A075B7D0 117 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 IGHV3OR16-13A0A075B7E8 117 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 IGHV4-30-2A0A087WSY4 118 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 A0A087X002 238 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 TGIF2-C20orf24A0A0A6YYL0 155 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 SMIM9A6NGZ8 99 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 RPL37AP8A6NKH3 93 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 CEACAM18A8MTB9 384 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 MPTX1A8MV57 137 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 C2orf74A8MZ97 194 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 LINC01619G3V211 115 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM72CH0Y354 149 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 ZG16O60844 167 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 CNMDO75829 334 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 IGKV3-20P01619 116 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 SEMG1P04279 462 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 PCCAP05165 728 aaPredicted RBP2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 CD5P06127 495 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 OR8U8P0C7N1 319 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 OR5H8P0DN80 308 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 GNB3P16520 340 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 F8A1P23610 371 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 PAX6P26367 422 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 AK4P27144 223 aaPredicted RBP2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 VDAC2P45880 294 aaPredicted RBP2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 RIDAP52758 137 aaKnown RBP2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 PSME3P61289 254 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 S100A12P80511 92 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 SKP2Q13309 424 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 AQP6Q13520 282 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 NRF1Q16656 503 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM72AQ5TYM5 149 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM72DQ6L9T8 149 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 UNQ9370/PRO34162Q6UXP9 181 aa2.79□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM92BQ6ZTR7 304 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms